| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0348 |
|---|
| Symbol | |
|---|
| ID | 3688834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 364784 |
|---|
| End bp | 365419 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637726804 |
|---|
| Product | homoserine/homoserine lactone efflux protein |
|---|
| Protein accession | YP_331763 |
|---|
| Protein GI | 76810040 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGGCA TCACCCATCT TGGCTTGTTC ATGGCGGCGG TCTTTCTGCT GAACATCACG
CCGGGGCCCG ACACCGCGTA CATCGTCGGC CGCAGCGTCG CGCAGGGGCG CGGCGCCGGC
CTCATGTCCG CGCTCGGCAT CTCGGCCGGC TGCTGCGTGC ACGTGCTCGC ATGCGCTTTC
GGCCTGACGG CGGTGCTCGC CGCGTCGGCC ACCGCGTTCA CGGTGATCAA GGTCGTCGGC
GCGGCCTATC TCGTCTATCT GGGCGTGCGT CTCATCTTCG CCAAGCAGGA GCCGGCGGCC
GAGCGGCCCG CGCGGCGAGG CGCGGACAAA TCGCTGCGCC AGCTGTTCAT GCAGGGGTTC
CTGACCAATG TGCTGAACCC GAAGGTGGTG CTGTTCTTCG TGTCGTTCTT TCCTCAGTTC
GTATCGGTCG ACAGCAACCA CAAGGTGCTC GCGTTCCTGA CGCTCGGCGC GGTGTTCCTC
GCGATGAGCA CCGTGTGGTC GTGCACCGTG GCGTGGGTCG CGGGCACCGT CACGCGACGT
TTTGCCGGCA AGCCTGGTGT GAAGAAATGG CTCGACCGCG GTGTCGGCAG CGCATTCGTC
GGCCTGGGCG TCAAGCTCGC GACGTCGACG CGCTGA
|
|---|
| Protein sequence | MFGITHLGLF MAAVFLLNIT PGPDTAYIVG RSVAQGRGAG LMSALGISAG CCVHVLACAF
GLTAVLAASA TAFTVIKVVG AAYLVYLGVR LIFAKQEPAA ERPARRGADK SLRQLFMQGF
LTNVLNPKVV LFFVSFFPQF VSVDSNHKVL AFLTLGAVFL AMSTVWSCTV AWVAGTVTRR
FAGKPGVKKW LDRGVGSAFV GLGVKLATST R
|
|---|
| |