| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0343 |
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| Symbol | topB |
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| ID | 3688778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 358475 |
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| End bp | 361084 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637726799 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_331758 |
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| Protein GI | 162210067 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAAG CACTCATCAT TGCGGAAAAG CCTTCGGTCG CGAACGACAT CGCGCGTGCT
TTGGGCGGCT TTACCAAGCA TGACGAATAC TACGAGAGCG ACGAATACGT GCTGTCGTCG
GCGGTCGGCC ACCTGCTCGA AATCGCCGCG CCCGAGGAAT ACGAAGTCAA GCGCGGCAAA
TGGAGCTTCG CGCATCTGCC CGTCATCCCT CCCCATTTCG ATCTGAATCC GATCGCGAAA
AGCGAGTCGC GCCTGAAGGT GCTGACGAAG CTGATCAAGC GCAAGGATGT CGACCGTCTG
ATCAACGCAT GCGACGCGGG GCGCGAGGGC GAGCTGATCT TCCGCCTGAT CGCGCAGCAC
GCGAAGGCCA AGCAGCCGGT CCAGCGCCTG TGGCTGCAGT CGATGACGCC CGCCGCGATC
CGCGACGGCT TCGCGCACCT GCGCACCGAC ATGGACATGC AGCCGCTCGC CGATGCCGCG
CGTTGCCGCT CGGAGGCCGA CTGGCTCGTC GGCATCAACG GCACGCGCGC GATGACGGCG
TTCAACAGCA AGGGCGGCGG CTTCTTCCTG ACGACCGTCG GCCGCGTGCA GACGCCCACG
CTGTCGATCG TCGTCGAGCG CGAGGAGAAG ATTCGCCGCT TCGTGCCGCG CGACTACTGG
GAAGTGCGCG CGGAATTCGT CTGCGCCGGC GGTTTCTACG AAGGCCGCTG GTTCGATCCG
AAGTTCAAGA AGGACGAATT CGACCCCGAA AAACGCGATT CGCGCCTCTG GAGCCTGCCT
GCCGCAGAGA CGATCGTCGC CGCGTGCCGC GACCACCTCG GCACGGTCAC CGAGGAATCG
AAGCCGTCGA CGCAGCTTTC GCCGCTGCTG TACGACCTGA CGAGCCTGCA GCGCGAGGCG
AACAGCCGCT TCGGCTTCTC CGCGAAGAAC ACGCTCGGCC TGGCGCAGGC GCTGTACGAG
AAGCACAAGG TGCTCACCTA TCCGCGTACC GACGCGCGCG CGCTGCCGGA GGACTACCTC
GGCACGGTGA AGTCGACGCT CGAGATGCTC AAGGAGAGCA ACAACTACCT GCCGCACGCG
AAGCAGGTGC TCGACAAGAA CTGGGTGAAG CCGAACAAGC GCATCTTCGA CAACTCGAAG
ATCAGCGATC ACTTCGCGAT CATCCCGACG CTGCAGGCGC CGAAATCGCT GTCCGAGCCG
GAACAGAAGC TCTACGACCT CGTCGTCAAG CGCTTCCTCG CGGTGTTCTT CCCGGCCGCC
GAATTCAAGG TGACCACGCG GATCACCGAG GTTGCCGGCC ATCACTTCAA GACGGAAGGC
AAGGTGCTCG TCGAGCCCGG CTGGCTGCAG GTCTACGGCC GTGACGCCGA GGGCGCCGAC
GCGAATCTCG TGCCGGTGCA GAAGGGCGAG AAGGTCAAGA CCGACAAGAT CGCCGCGCAC
GGCCTCACGA CGAAGCCGCC CGCACGCTAT TCGGAAGCGA CGCTGCTGTC GGCGATGGAA
GGCGCGGGCA AGCTCGTCGA AGACGACGAA CTGCGCGAGG CGATGGCCGC GAAGGGCCTC
GGCACGCCGG CCACGCGCGC GGCGATCATC GAAGGCCTGC TCGGCGAGAA GTACCTCGTG
CGCGAAGGCC GCGAGCTGAT TCCGACCGCG AAGGCGTTCC AGCTGATGAC CCTGTTGCGC
GGCCTCGGCG TGAAGGAGCT GACCGCGCCC GAGCTGACGG GCGAATGGGA ATACAAGCTG
TCGCAGATGG AGCGCGGCAA CCTGCAGCGC GACGCGTTCA TGCAGGAAAT CGCGCGGATG
ACGCAGACGA TCGTCAAGCG CGCGAAGGAA TACGACTCTG ACACGATCCC GGGCGACTAC
GCGACGCTCG AAACGCCGTG CCCGAACTGC GGCGGCCAGG TCAAGGAGAA CTATCGGCGC
TTCGCGTGCA CGAAATGCGA ATTCTCGATC TCGAAGATTC CGGGCAGCCG GCAGTTCGAG
ATCGCCGAAG TCGAGGAACT GCTGCGGAAG AAGGAGATCG GGCCGCTATC GGGCTTCCGC
AGCAAGATGG GCCGACCGTT CTCGGCGATC CTCAAGCTCA CGTTCGACGA CGAGACGAAG
AATTACAAGC TCGAATTCGA CTTCGGCCAG GAGCAAGGCG GCGAGGAAGG CGAAGCGCCC
GATTTCTCCG CGCAGGAGCC GGTCGGCGCG TGCCCGAAGT GCAAGGGCCG CGTGTTCGAG
CACGGCATGA GCTATGTCTG CGAGCACGCG GTCGCGAACC CGAAGACCTG CGACTTCCGC
TCCGGCAAGG TGATCCTGCA GCAGGAGATC ACCCGCGAGC AGATGGCGAA ACTCCTCGAG
AACGGCCGCA CCGATCTGCT GCCGAACTTC AAGTCGTCGC GCACCGGGCG CAACTTCAAG
GCGTATCTCG TCAAGCAGCC GGACGGCAAG ATCGGCTTCG AGTTCGAGAA GAAGGAGCCG
AAGCCCGCAG CCGCGAAGAA GACCGCGGCC AGATCGTCGG CCGCAGCCGA CGATGCGGCA
GCCGACAGCG GGGAGAAAGC CGAGAAGAAG GCGGCACCTG CGCGCAAGAC GGCCGCGCGC
AAGACGCCGG CCCGCAAGAC GGGCTCGTGA
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| Protein sequence | MSKALIIAEK PSVANDIARA LGGFTKHDEY YESDEYVLSS AVGHLLEIAA PEEYEVKRGK
WSFAHLPVIP PHFDLNPIAK SESRLKVLTK LIKRKDVDRL INACDAGREG ELIFRLIAQH
AKAKQPVQRL WLQSMTPAAI RDGFAHLRTD MDMQPLADAA RCRSEADWLV GINGTRAMTA
FNSKGGGFFL TTVGRVQTPT LSIVVEREEK IRRFVPRDYW EVRAEFVCAG GFYEGRWFDP
KFKKDEFDPE KRDSRLWSLP AAETIVAACR DHLGTVTEES KPSTQLSPLL YDLTSLQREA
NSRFGFSAKN TLGLAQALYE KHKVLTYPRT DARALPEDYL GTVKSTLEML KESNNYLPHA
KQVLDKNWVK PNKRIFDNSK ISDHFAIIPT LQAPKSLSEP EQKLYDLVVK RFLAVFFPAA
EFKVTTRITE VAGHHFKTEG KVLVEPGWLQ VYGRDAEGAD ANLVPVQKGE KVKTDKIAAH
GLTTKPPARY SEATLLSAME GAGKLVEDDE LREAMAAKGL GTPATRAAII EGLLGEKYLV
REGRELIPTA KAFQLMTLLR GLGVKELTAP ELTGEWEYKL SQMERGNLQR DAFMQEIARM
TQTIVKRAKE YDSDTIPGDY ATLETPCPNC GGQVKENYRR FACTKCEFSI SKIPGSRQFE
IAEVEELLRK KEIGPLSGFR SKMGRPFSAI LKLTFDDETK NYKLEFDFGQ EQGGEEGEAP
DFSAQEPVGA CPKCKGRVFE HGMSYVCEHA VANPKTCDFR SGKVILQQEI TREQMAKLLE
NGRTDLLPNF KSSRTGRNFK AYLVKQPDGK IGFEFEKKEP KPAAAKKTAA RSSAAADDAA
ADSGEKAEKK AAPARKTAAR KTPARKTGS
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