| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0342 |
|---|
| Symbol | |
|---|
| ID | 3690319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 357198 |
|---|
| End bp | 358253 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637726798 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_331757 |
|---|
| Protein GI | 76808955 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCATT TGCAGTCGAT GCGAGTGTTC GTCAAGGTCG CGGATCTCGG CAGTTTCGCC
CGGGCGGCGA GCGCGATGGA CATCTCGAAT GCGGTCGCGA CGCGCCACGT CGCCGACCTC
GAAGGCCGGC TCGGCACCCG CCTTCTGAAT CGCACCACCC GAAGCCTGTC GCTGACCGAA
TCCGGCCAAG TTTACCTGGA GCGGGCGCGT CAGATCCTCG ACGAACTCGA AGACGTCGAG
CAGATGGTCG TCGCGCGCAA TCACGAGCCC GTCGGCACGC TGCGGGTCGT CGCGCCCGTC
GTGTTCGGCC TGCACAATCT CGCGCCGGTC TTGCAGACGT ATACGCAGCG TTTCCCGAAG
GTCATCCCCG ACCTGACCCT CGTCGATCGT CAGGTCGATC TCGTCGAAGA GGGGTTCGAC
GTCGGCATCG TGATCACGCG GCAGATGCGC AGTGCGAGCA TCGTCACGCG CCGGCTGACC
ACGGGCTGCA TGGTGGTCTG CGCGACGCCG AGCTACCTGG AGAAGCACGG CATGCCGACG
CATCCGGAGC AACTCGTCGA GCATCCTTGC CTGAGCCTGC CGTCCGAATA TTGGGGAGAC
GAGCGCGTAT TCACCGGCCC GGACGGCGAA GTGCGCGTAC GGCCGTCGAA CGTCGTCGTC
GCGAACAACA CCGAGATGCT GCGCCAGTTC GCGATGCTCG GCATGGGCGT CGCGATCCTG
CCGAGCTATC TGATCGGCAG CGACATCGCG CGCGGCAAGC TCGTGCGCTT GCTGAGCGAC
TACCGGCTGC CGCAGGTCGA GATCAACATC GCGTACCCGA GCCGCCGCCA CCTGCCGGCG
AAGGTGCGCA CGTTCATCGA CCATCTCGTC GAGCACTTCA GCCAATCGCC GGACACGATG
CTCGGCGAGC AATGGGCGAC GCAGGGCGTC GCGGGCCAGC ACGTCGATGC GCTGCCCGCC
GACGCGCTCG CCGAGCGCTC GAGCGCCGAT CCGGCGCTGT CGCCGCGTCT GCCGCGCGCG
CCGCGGGCGC GCACCGTCGT GCCGTCTCCG CTGTAA
|
|---|
| Protein sequence | MDHLQSMRVF VKVADLGSFA RAASAMDISN AVATRHVADL EGRLGTRLLN RTTRSLSLTE
SGQVYLERAR QILDELEDVE QMVVARNHEP VGTLRVVAPV VFGLHNLAPV LQTYTQRFPK
VIPDLTLVDR QVDLVEEGFD VGIVITRQMR SASIVTRRLT TGCMVVCATP SYLEKHGMPT
HPEQLVEHPC LSLPSEYWGD ERVFTGPDGE VRVRPSNVVV ANNTEMLRQF AMLGMGVAIL
PSYLIGSDIA RGKLVRLLSD YRLPQVEINI AYPSRRHLPA KVRTFIDHLV EHFSQSPDTM
LGEQWATQGV AGQHVDALPA DALAERSSAD PALSPRLPRA PRARTVVPSP L
|
|---|
| |