Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0293 |
Symbol | prtR |
ID | 3689123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 300237 |
End bp | 300995 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637726749 |
Product | transmembrane regulator PrtR |
Protein accession | YP_331709 |
Protein GI | 76811681 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000206398 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTC CGCCCGACGA ACACGATCTT CACGCCTATG TCGACGGCCG GCTCGACGCC GATGCGCGCA CGGCCGTCGA ACGCTGGCTC GCGCTGCATC CGGCGCGCGC GGAGCAGGTG CGGCGCTGGC GGCAAGATGC GCAGCAACTG CGCGCGGCGC TCGATTCGCT CCCGACGCCC GCTCCGACGA GAACGCTCGA TCCCGCCGTG CTGCGCGCGC GCCGCGCCGG CCGCGCGCGT GCGCGGCTCG CGATGGCGGC GTCGCTCGTG CTGTGCGTTG CGCTCGGCGC GATCGGCGGC TGGCAGGCGC ACGGCTGGAG CGGCGCGCCC GCCGCGCCGA TGAGCGACGC CGTCGCCGCG TACAAGCTGA TGGTGGTCGA TCGCAGCGCG CGCGTCGACG TCGCGCAAAA GCAGCCGGGC GAATTACAGG CGTGGGTCGC GCGCGCGCTC GGCGCGGCCG CACGGCTACC GGATCTGAGC AGCGCGGGCT TCGCGCCCGT CGGCGGGCGG CTCTTCGCGA CCGAACGCGG CGCGGCCGCG ATGGTGCTGT ACGAGGACGC GGCCGGGCGC ACGCTGAGCT TCTATATTCG GCCGCCCGAG TCGGCGAACC GTCTGCTCGC GGCAGGCGAG CGCGCCGACG GCGCGCTGCT CGCGCGCTAC GGATCGGCGC GCGGGTTCAA TTACGCGGTG GTCGGGCGCG CGGACAGTGT CGGCGAGGCA GCCGTCGCGC GCGCGCTCGA GGTCGAGGGG CAGAGCTGA
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Protein sequence | MNIPPDEHDL HAYVDGRLDA DARTAVERWL ALHPARAEQV RRWRQDAQQL RAALDSLPTP APTRTLDPAV LRARRAGRAR ARLAMAASLV LCVALGAIGG WQAHGWSGAP AAPMSDAVAA YKLMVVDRSA RVDVAQKQPG ELQAWVARAL GAAARLPDLS SAGFAPVGGR LFATERGAAA MVLYEDAAGR TLSFYIRPPE SANRLLAAGE RADGALLARY GSARGFNYAV VGRADSVGEA AVARALEVEG QS
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