Gene BURPS1710b_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0245 
SymbolfliR 
ID3691860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp254857 
End bp255639 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content68% 
IMG OID637726702 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_331662 
Protein GI76810974 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTCCG TCACCTACGC GCAACTGAAC GGCTGGCTCA CCGCCTTCCT GTGGCCGTTC 
GTGCGGATGC TCGCGCTCGT CGCGATCGCG CCGGTGACGG GCCACCGCTC GACGCCCGTG
CGCGTGAAGA TCGGCCTCGC GGGCTTCATG GCGCTCGTCG TCGCGCCGAC GCTGCCGCCG
ATTCCGGTGG CCACCGTGTT CTCCGCGCAG GGCGTGTGGA TCATCGTCAA CCAGTTCCTG
ATCGGCGCGG CGCTCGGCTT CACGATGCAG ATCGTGTTCG CGGCGATCGA GGCGGCGGGC
GACATCATCG GCCTGTCGAT GGGGCTCGGC TTCGCGACCT TCTTCGATCC GCATTCGAGC
GGCGCGACGC CCGTGATGGG GCGTTTCCTG AACGCGGTCG CGATCCTCGC GTTTCTCGCG
TTCGACGGGC ATTTGCAGGT GTTCGCGGCG CTCGTCGATT CGTTCAGGCT CGTGCCGGTC
TCGGCCAATC TGCTGCGCGC GGCCGGCTGG CAGACGCTCG TCGCGTTCGG CGCGGCGATT
TTCGAGATGG GGCTGTTGCT CGCGCTGCCC GTCGTCGCGG CGCTGCTGAT CGCGAATCTC
GCGCTCGGCA TCCTCAATCG CGCCGCGCCG CAGATCGGGA TCTTCCAGGT CGGCTTTCCG
GTGACGATGC TCGTCGGCCT GCTGCTCGTC CAGCTGATGG CGCCTAACCT GATTCCGTTC
GTCGGGCGGC TGTTCGATAC CGGCGTCGAT TTCGTCGGGC GCGTCGCGGC CGGCATGCAT
TGA
 
Protein sequence
MFSVTYAQLN GWLTAFLWPF VRMLALVAIA PVTGHRSTPV RVKIGLAGFM ALVVAPTLPP 
IPVATVFSAQ GVWIIVNQFL IGAALGFTMQ IVFAAIEAAG DIIGLSMGLG FATFFDPHSS
GATPVMGRFL NAVAILAFLA FDGHLQVFAA LVDSFRLVPV SANLLRAAGW QTLVAFGAAI
FEMGLLLALP VVAALLIANL ALGILNRAAP QIGIFQVGFP VTMLVGLLLV QLMAPNLIPF
VGRLFDTGVD FVGRVAAGMH