Gene BURPS1710b_0242 details

Gene Information

• Locus tag: BURPS1710b_0242
• Symbol: fliO
• ID: 3690312
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 252943
• End bp: 253608
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 637726698
• Product: flagellar protein FliO
• Protein accession: YP_331658
• Protein GI: 76811756
• COG category: [N] Cell motility
• COG ID: [COG3190] Flagellar biogenesis protein
• TIGRFAM ID: [TIGR03500] flagellar biosynthetic protein FliO

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.682736
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCGC GCTTCGCGCC GCTCGCCGCG CGGGCTGTTC CGGTGTGCGT TCCGGCGTTC 
CTTTCGCCGC GCCGGGCAGC CGAACGCGCG CCGCGCGGCA GGCGTCGCGC GCCGGCGGCG 
CTCGCCGCGC TGGCGAGCGG CACGGCGGCG CTGCCCGTCT CGGCCGCCGA CATGAACGCG 
GTGAATCACG CGGCGTCGCT CGCATCGGGC GTCGTCGTCG GCTCGGCCGC GCCGTCGCTC 
GGCGTCGGCG CGGTGTTGCA GACGCTCGTC GGGCTCGCGG TCGTGATCGG CCTCGTGTTC 
GGCTGCGCGT GGCTCGCGCG GCGCTTCGGC TTGCAGCCGC AACGGCGCGG CGGCGCGCTG 
AAGATCGTCG CGAGCGTCGC GGTGGGCGGC AAGGAAAGCG CGACCGTCGT CGAGATCGGC 
GATACCTGGC TCGTGCTCGG CGTCGCCCCC GGCAACGTGC GCCTGCTGCA CACGCTGCCC 
GCCGGCTCGG CGGGCGTGAT CGGCGCGCCC GCGGGCGGCG GCCTGACTCG CTCGCCCGGC 
GCGCCGGGCG GCACGGCGAT GTCCGGCCCG TTGCCCGAGG GCGCTTCCTT CGGGGCGCGC 
TTTCGCGACG CCATGCTCGG CGAGGCCGCG AAGCGCTTCA AGCGCGACGG CGGCAAGGAT 
CGCTGA 

 

Protein sequence

MKPRFAPLAA RAVPVCVPAF LSPRRAAERA PRGRRRAPAA LAALASGTAA LPVSAADMNA 
VNHAASLASG VVVGSAAPSL GVGAVLQTLV GLAVVIGLVF GCAWLARRFG LQPQRRGGAL 
KIVASVAVGG KESATVVEIG DTWLVLGVAP GNVRLLHTLP AGSAGVIGAP AGGGLTRSPG 
APGGTAMSGP LPEGASFGAR FRDAMLGEAA KRFKRDGGKD R