| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0217 |
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| Symbol | mnmC |
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| ID | 3689709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 225894 |
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| End bp | 227876 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637726673 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_331633 |
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| Protein GI | 162210059 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC GAATCGTTCC GGCGACGCTC GTCTTCCGCG AGGACGGCAC CGTCGTCTCG
CCGCTCTACG GCGACATCTA CCACAGCGCG GCCGGCGCGC TCGCCCAGGC CGACCACGTG
TTCATCCGCG GCAACGGCCT GCCGGAACGT TGGCGGCACG AGCGAGCTTT CACGATTATC
GAGACAGGAT TCGGCACGGG CTGCAACTTT CTCGCGACAT GGGCTGCATG GCGTGCGGAT
CCGTCGCACT GCGAGCGGCT TCACTTCGTC TCGGTCGAAA AGCATCCGTT CGCGCGCGAA
GATCTGCGGC GCGCGGCCGC GCATATCGTT GCATATACAA CTATTACAAC TATTACGCCG
ATTGCGCCGC TCGTCGACGA GCTCGCGAAC GCATGGCCCG CGCTGACGCC GGGCGTGCAT
CGTCTCGAAT TCGACGACGG GCGCGTCACG CTCACGCTCG TGTTCGGCGA CGCGCTCGAC
GTGCTGCCGA ACCTCGCGCT GCGCGCGCAC GCGTTCTATC TCGACGGCTT CGCGCCGTCG
AAGAACGCGG ATTTGTGGTC GCCCGCGATC TTCAAATCGC TCGCGAAGCT TGCCGACGAA
CGCGCGACGT TCGCGACCTA CACGAGCTCC GGCGCCGTCA AGCGCGCGCT CGACGAAGCG
GGTTTCGCGT ACCGAAAAGT CGACGGCTTC GCCGGCAAGC GCGCCATGCT CGTCGGCGAA
TTCGCGCCGC GCTGGCGCGT GCGCCGCCAT GAGCCGCCGC GTGCGTTCAG CACGGATAGA
CGCGACGCGA TCGTGATCGG CGCGGGCCTC GCCGGCTGCG CGGTCGTCGA GCGGCTCGCC
GCGCGCGGCT GGCACGTGAC GCTGATCGAG CGGCGCGAGC GGATCGCGAG CGAGGCGTCG
GGCAACCCCG CCGGCGTATT CCATCCGATG ATCGCGCGCG ACGATAACCT CGCGGCCCGC
CTGTCGCGCG CCGGCTTCCT GCACGCGCTG CATCGCTGGC GCGCGCTCGA GCGCGCCGGG
CATGCGTTCT CGCGCAGCAC ACATGGCCTC GTTCAGCTTG CCACGTCGGA CGATGAATTC
GAGCGGATGC GCGAGAGCAT CGACGCGCTC GGCGTGCCGG CCGAGCTCGC CTCGGCGCTG
TCGCGCGACG ACGCGAGAGC GCTGTTGCGA ACCGACGTCG CGCACGGCGG CTGGCTGTTT
GCGCAGGGCG GCTCGATCAG CCCCGCCGCG CTCGCGGCCG CTCAGTGCGC GGCCGCGGGC
GACAGGCTTT CGCGCATCGT CGGCGTCGAG ATCGCGCGGC TCGAACGCGG CGGCGACGGC
CGCTGGCGCG CGCTCGACGC ATCGGGCGCG ACGATTGCGC AGGCGAGCGT CGTCGTCGTC
GCGAACGCGG CCGATGCGGC GCGCATCGCG GGCCTGCGGC ATGCGCCGAC GCAACGCGTG
CGCGGCCAGT TGACGCTGCT GCCGCCGGGC AGCGCGCCCG CCGTGCCGCT GCCCGTGATC
GGCGACGGCT ACGTCGTGCC GCTCGCGAAC GGCGTCACGC TGACGGGCGC AACCTATGAA
CCGGACGATA CGGATGCGAC ACCGCGCGAA GCCGGCCATC GCGAGAACCT CGAGCGGCTC
GAACGGCTGC TGCCGGCGTT TTCCGCGAAC GCGCTCGATG CGGGCGCGCT CGCGGGCCGC
GTCGGCTTTC GCTGCGTCGC GAGCGACCGG CTGCCGCTCG TCGGCGAGCT CGGCGACGAG
GCGGCGGCCG CGCGCGAGGC GGCGGCGCTG ACGGGCGCAC GGCTGCGCGA CGTGCCGCGC
GCGACGGGCC TCTACGGCGC CTTCGGTTAC GGCTCGCGCG GGCTCGTCTG GGCGACGCTC
GGCGCCGAGC TGATCGCCGC GCAGATCGAC GGCGAGCCGT GGCCGCTCGA GCGCGAACTC
GCCGAAGCGA TCGATCCGGC GCGCTTCCTC GTTCGCGCGC TGCGGCACGG CCGCGTCGCC
TGA
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| Protein sequence | MTDRIVPATL VFREDGTVVS PLYGDIYHSA AGALAQADHV FIRGNGLPER WRHERAFTII
ETGFGTGCNF LATWAAWRAD PSHCERLHFV SVEKHPFARE DLRRAAAHIV AYTTITTITP
IAPLVDELAN AWPALTPGVH RLEFDDGRVT LTLVFGDALD VLPNLALRAH AFYLDGFAPS
KNADLWSPAI FKSLAKLADE RATFATYTSS GAVKRALDEA GFAYRKVDGF AGKRAMLVGE
FAPRWRVRRH EPPRAFSTDR RDAIVIGAGL AGCAVVERLA ARGWHVTLIE RRERIASEAS
GNPAGVFHPM IARDDNLAAR LSRAGFLHAL HRWRALERAG HAFSRSTHGL VQLATSDDEF
ERMRESIDAL GVPAELASAL SRDDARALLR TDVAHGGWLF AQGGSISPAA LAAAQCAAAG
DRLSRIVGVE IARLERGGDG RWRALDASGA TIAQASVVVV ANAADAARIA GLRHAPTQRV
RGQLTLLPPG SAPAVPLPVI GDGYVVPLAN GVTLTGATYE PDDTDATPRE AGHRENLERL
ERLLPAFSAN ALDAGALAGR VGFRCVASDR LPLVGELGDE AAAAREAAAL TGARLRDVPR
ATGLYGAFGY GSRGLVWATL GAELIAAQID GEPWPLEREL AEAIDPARFL VRALRHGRVA
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