Gene Ava_5064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5064 
Symbol 
ID3683209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6359165 
End bp6361477 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content48% 
IMG OID637720425 
ProductCd/Co/Hg/Pb/Zn-translocating P-type ATPase 
Protein accessionYP_325556 
Protein GI75911260 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00217431 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.549682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA TGACAGTTCA ACTAGCGTCG CTTCCTGTGA AAGAGTCTTA TGTGACATTG 
GAGGAAAAGA GTGGGGAAGT ATCTATAACT TCCCTACCTT ACAAGATAGT AGGGGAACAA
AACAGCAGAG TAGCGCTAAC TTCTGCTCAA GTACAATCCT CTAAGAAAAC TCCCCATGTC
ACTTATAGTG TTGTCCATGC AATTCAGGGT AGGTTGCGGT TGCGTGTACC TCGCTTACGC
AACGATAAAG ACTATGGACA AAGGTTACAA ACTTTGCTGG AAGCTGATCC CCTGGTGACA
ACTGTTAAAA TTAAGCCAGC AGCCGCATCC TTAGTTGTTA ACTATAAAGC CAGTGCTGTA
ACTGATGCTA AGATGCGATC GCGTCTTGGC TGTCTGATGA TAGCTGCAAG TGATCCTGGG
ATCGTCTTGT TGAATCCGAA AAAGGTATCT CCACAAGAAG AGGAAAAGCC TTGGCCGGGA
ATGCAGCTTT CGGTTTTAGC CACTGGCTTG GCGGTGCTGG GGGGGCCTTT AGGAGTAGCG
GTTCCACCAA TTGTCACGGC GGGAACCATT GCTCTAGCAA CCTTACCCGT ATTTAAAAGA
GCAGTAGATG GAATTGTTAA GGAACGCAAG TTAAGTATAG ACTTCTTAGA CTTTATTGCG
ATCGCCATTA CTACAGTCCA AGGTCAGTTT CTCACCCCAT CCCTGATGCT GAGTTTAATT
GAGATTGGGG AAAATATCCG CGATCGCACT GCTCGTTCTT CCAAAATGCA AACATTGGAT
CTGCTGGGTT CCTTGGGTCA ATTTGCTTGG GTAGAACGTG ATGGTGAGAA GACCCAAATC
CCCATCCAAC AAGTGTTACC AGGAGACACT GTGATTGTCT ATCCAGGGGA ACAAATACCC
ATAGATGGCA CAATCCTCAG AGGTAAGGCT TTACTCGATG AACAGAAGCT AACAGGGGAA
TCTGTACCCA TTTTGAAAAA GCAGGGACAG TCTGTATTTG CTTCAACCTT AGTACGGGAA
GGACAAGTAT ATATACTTGC CGAGCGCATC GGTAATGATA CGCGAGCAGG GCAGAGCATC
AAACTGATGG AAGAAGCCCC CGTTCATGAT ACTCGGATGG AAAATCATGC CACCAGAATT
GCTGAAATTG CGGTAGTGCC AACTTTGCTA CTAGGGGCAG CCGTATTTGC CGTTACCCGT
AACCCAGTCA GGGTTGCCAG CATTCTTACC CTTGACTTAT GTACAGGGAT TCGTGTATCC
ATTCCCACAA CGGTTTTAGC AGCTCTCTCC TATGCAGCAC GACAAGGAAT TCTCATTCGG
AGTGGTCGCG CCTTAGAGCA GTTAGCAGAA ATTGATACCA TTGTTTTTGA TAAAACAGGC
ACACTCACCC AAGGGGAAGT AGCTGTAATT GGCGTTGATA GTTACAATCC TGAAGTTACC
CATGATCGCA TATTAGCGAT CGCCGCCGCC GCCGAACAGC GTTTAACCCA CCCAGTAGCC
GAAGCCATAG TCCGCTATGC AGAAGCCCAA CAAGTAGCGA TCCCCAGCCG CAGCAAATGG
GACTATAAAC TTGGTTTGGG TGTGAAGGCA GAAATTGACG GTGAGACTGT TTACGTCGGT
AGTGAGCGCT TTTTACGTCA GGAAGGCGTT GATATGGCAG CCCTCAACGG CAATGGACAC
AAAGCCACAT CAGTGATTTA TGTCGCCAGT AACGGGCAAC TTCAAGGTAA AATAAGATAT
AGTGATATTC TCCGCCCTGA GAGTCGAGAA GTAATTTCCC AACTCATGAC GGTAGAAGGT
GTGGAAGTCC ATATGCTCAC CGGCGATAAC AAGCGTACAG CTACGACTGT GGCAGCAGAA
TTGGGAATTG CCCCAGCGCA TACCCATGCA GAAGCTTTTC CCGAACAAAA AGCAACGGTA
GTCCGTGGAC TGCACGAACA AGGTAAGACA GTTGCATTTG TTGGGGATGG GATCAACGAT
TCGCCAGCTT TAGCCTACGC TGATGTTTCT GTGTCCTTTG CCCACGGTTC GGAAATCGCC
CGTGAAACCG CCGATGTGGT GTTAATGCAG AATGACCTAC ATGGATTATT AGAAGCAATT
GCGATCGCTC GTCAAGCCAA GAGTTTGATT CGACAAAACA CCGGCATCGT CGCTATCCCC
AACTTGGGAG CCTTATTGGT AGCGGTGTTG TTTGGTCTAA ACCCATTAGC AGCCACAGTA
GTCAACAATG GCTCAACAAT AGTTGCTGGA GTGAACGGTT TACGCCCCAT CCTCAAGCAA
TCCCCAAAAA AAGCTCTCCC AGCAGAGAGA TGA
 
Protein sequence
MAKMTVQLAS LPVKESYVTL EEKSGEVSIT SLPYKIVGEQ NSRVALTSAQ VQSSKKTPHV 
TYSVVHAIQG RLRLRVPRLR NDKDYGQRLQ TLLEADPLVT TVKIKPAAAS LVVNYKASAV
TDAKMRSRLG CLMIAASDPG IVLLNPKKVS PQEEEKPWPG MQLSVLATGL AVLGGPLGVA
VPPIVTAGTI ALATLPVFKR AVDGIVKERK LSIDFLDFIA IAITTVQGQF LTPSLMLSLI
EIGENIRDRT ARSSKMQTLD LLGSLGQFAW VERDGEKTQI PIQQVLPGDT VIVYPGEQIP
IDGTILRGKA LLDEQKLTGE SVPILKKQGQ SVFASTLVRE GQVYILAERI GNDTRAGQSI
KLMEEAPVHD TRMENHATRI AEIAVVPTLL LGAAVFAVTR NPVRVASILT LDLCTGIRVS
IPTTVLAALS YAARQGILIR SGRALEQLAE IDTIVFDKTG TLTQGEVAVI GVDSYNPEVT
HDRILAIAAA AEQRLTHPVA EAIVRYAEAQ QVAIPSRSKW DYKLGLGVKA EIDGETVYVG
SERFLRQEGV DMAALNGNGH KATSVIYVAS NGQLQGKIRY SDILRPESRE VISQLMTVEG
VEVHMLTGDN KRTATTVAAE LGIAPAHTHA EAFPEQKATV VRGLHEQGKT VAFVGDGIND
SPALAYADVS VSFAHGSEIA RETADVVLMQ NDLHGLLEAI AIARQAKSLI RQNTGIVAIP
NLGALLVAVL FGLNPLAATV VNNGSTIVAG VNGLRPILKQ SPKKALPAER