Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_5056 |
Symbol | |
ID | 3683538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6349781 |
End bp | 6351202 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637720417 |
Product | Phage integrase |
Protein accession | YP_325548 |
Protein GI | 75911252 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.343108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAACG GTGCAAAAAC ACCCACAGGT AAGGCTAAGA AGGGTCAAGT AGTTGTCAGG ATAGACTCTA GTAGCGTTAA GGCTTGCTTC CCTCGGAGTT ACTTTGCAGA TGGTAAGCAA ATAAAGCTAG GGACAGGCAT TAACCCAGAT GACTGGGAAG CTACAGCCGC AAAATTACAG CGTCGGTTAC AACTTGAGTT AGAAGATGGG AAGTTATCTA CCAATGAGGG CATATTCAAT TTAGGTAGAT ACCAGGAAAT ACTTGAAGAA TATGGTTTAA GAGCAAAACT CAGATTAGTT AGAGATGTTT CCGCGACAAG TAGCAGTGAC GAGATACCAC CTAAACCCCA GTTATCGCTA CTAGAAGTCT GGGATATGTA TTGTGAGTAC AGAAAACCAG GATTGAGGGA GAGTACGTAT AAAAATTTAT ATCAAACGCT TTATCGTAAT TTTATTAAAT TAGCAATAGA AGCTACAAAG AGTGAAGATG CTTTAAAAAT CAGGAATTGG TTGATAGAAA ATAGGAACAC TAAATCAACT AAGCAGATTT TAATTAATCT CTCAAAAGCC TATCAATTAG GCATAAAAAA CAAGCTATTG ACCCATAATC CCTATGACGG TCTAGCCGAC GAGATAACCA CTAAAGGCGC TAAAGGGAAA AAACAAAATG AAGTAAGCAG CGATAATGAT GTGCTTGACC AATCAAAAGC CTACACCTGG GATGAAGTAC AAGCAATACT TGATTTAGTG AAGTACGAAT ACACCCATTA TTATAATTTC ATTAAATTCA AATTCCTTAC AGGATGTAGA ACTGGTGAAG CTGTAGCGTT TATGTGGTGC GATATTGAGT GGGACAAAGA GAGGATTTTA ATTCGTAGAA CTTATGAACC TAGAACACGT AAGTTTTATC CATTGAAAAA TGATAGTAGT TACAAGGGTG AATTAATTCG CAGGTTTCCG ATCATTAGAG ACGGTGAGCT ATGGAAGCTA TTACAATCAA TTCCTGAAGG TCAAGATAAT GATGTGGTGT TCACAACCAA AAACGGAAAA ATTATTAATG ATGCTAATTT TGGGCATATT TGGCGAGGAA CACACAATCA ACAAGGAATA ATCCCTCAGT TAATAGAACA AGGCAAACTC TCAAAGTATC TTTCACCTTA CAACACACGC CATACATTCA TTACACATCA AGTATTTGAT TTAGGACAAG ATGAAAAAAT AGTTGCTAAA TGGTGTGGAC ACAACATCGA CGTCAGCAAT AAGCATTACC AAGACGTGGC TATCTTCGCA GAGAAAACTA ATCCCGATTT GCCAGCTAAC CAACAATCAA TACAACAAAC AGAGTTAGAT ATCCTGAAAG AACAGTTAAG GCAACAACAG GAGTTAATCA ATAAATTACT AGCTGAGAAA GAGACTAAAT AG
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Protein sequence | MVNGAKTPTG KAKKGQVVVR IDSSSVKACF PRSYFADGKQ IKLGTGINPD DWEATAAKLQ RRLQLELEDG KLSTNEGIFN LGRYQEILEE YGLRAKLRLV RDVSATSSSD EIPPKPQLSL LEVWDMYCEY RKPGLRESTY KNLYQTLYRN FIKLAIEATK SEDALKIRNW LIENRNTKST KQILINLSKA YQLGIKNKLL THNPYDGLAD EITTKGAKGK KQNEVSSDND VLDQSKAYTW DEVQAILDLV KYEYTHYYNF IKFKFLTGCR TGEAVAFMWC DIEWDKERIL IRRTYEPRTR KFYPLKNDSS YKGELIRRFP IIRDGELWKL LQSIPEGQDN DVVFTTKNGK IINDANFGHI WRGTHNQQGI IPQLIEQGKL SKYLSPYNTR HTFITHQVFD LGQDEKIVAK WCGHNIDVSN KHYQDVAIFA EKTNPDLPAN QQSIQQTELD ILKEQLRQQQ ELINKLLAEK ETK
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