Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_5048 |
Symbol | |
ID | 3683529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 6338889 |
End bp | 6340601 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637720408 |
Product | hypothetical protein |
Protein accession | YP_325540 |
Protein GI | 75911244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.237947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.453102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCTG TAGCAGAGCA GATGCCCCTC AGTGAAAGAA CAATGTCTCA GGTTAATGTA CTGTTTGTCA ACCCAAGTGC CGGGGATGAC ACAGTAGGTA ATGGTGGTGA AAATACACCT TTGAGGACTA TTACCCAAGC ATTGAAACTA GCCAGCCCTG GTACAGTAAT TAAACTGACA CCGGGTAATT ACAGTGTGGA AACAGGGGAG ACGTTCCCTT TAATGCTCAA ACCAGGTGTT TCGATTCAGG GAAACACCAG TAACAAAGGG CAGGAAGTTA AAATTCAGGG CGGAGGCCTG TTTCTCAGTC GCAGTTTTGG AGGGCAAAAT GTCGCCATCG TTGGTGCTAA TCAAGCAAGC CTAACAGGGG TGACAATTAC AAATACCAAT CCCCGTGGTT ATGGTTTATG GGTTGAATCG AGTAATCCAG TCATTAGTGA AAATACTTTT ACAGGCAATA CCCAAGATGG TATTTCTGTG ACTGGTAACA GTGCTACCAC AATCACCAAA AACTATTTTT ACCGTAACGG AGCTAACGGT ATCACTATTG GTGGTAATTC CCCCGCCCAG GTGCGAGAAA ATGTGTTTGA GGAAACTGGT TTTGGCATTA ATGTCGCCCA AAATGCCGTG CCAATGTTGG TGAGTAATCA AATTCAAAAT AATCGTGCAG GAATCATTGT TCAAGCTAAT GCTCGCCCGA TTTTACGGAA TAATTTAATT CAAGGTAGTA AAGAAGATGG CGTAGTGGCG ATCGCTCAAG CAATGCCGGA TTTAGGTAAT GCTACTGAAT CGGGTGGTAA TGAATTTCGC AACAATGCCC GTCATGACAT TAATGCTAGT GCAGCTAAAC AGGCGATCGC CGCAGTTGGT AATACAATTG ACAGCAAACG AATTACTGGT AAAGTAGCCC TCAACGCCCA AGATGCACCC GTGGCTAATA ATGCCCCGCC TACTGCCGTA TCCAACCGTG CGCTGCCAAC CATCCCTAAT GAGAGGGAAG TTATATTTAC CGCCCCTAGT GTATCCAATA CTACTAATCG ACCAAGTAAG TCTGTGGTTC GTAGCCAAGG TAATAGCCAA TTACCAACAC TAGTATCAGC TGATGCGCCC TTGACTGTAC CTAGATACAA TCGACAACCA CCAGCCCCGA TTCCTGAACG AGTCACAAAC CAAAATATAC CAGGAAATAT TCCCACCACT TCTACAACTA ATCTCCCCCC CGTAGCCACA ACGAGGACAC AGACAGCACA GTTAAATTAC GTGCAGATTG ACCCCAACAC CATTGAGTTT GTCGCACCCC AAACCGAGCA ACCAGAGCAA ATCGTCAATA CTCAAGCACC ACCCTTGAAT GTACCCCCCC AATCAAGAGT TAGTGATACT AGTATTTTGC CTGTACCTGC TGGTAATATT CCCCTGGGTG ACACCCGCAA TTTGCCAAAG ATAGCAGCAC CTCAAGCTAA TACAACGGGT TTTGGTGGTA ATTATTTATC AGCCACCAGT GGCAACTCTG TGCGCTATCG CGTGGTAGTA GAAGCCACAA ATGACAGAGA GCAAGAATTA GTGAAATTTT TGGCTCCTGG GGCATTTTCC ACCTTCTGGC AAGGTCGCAG GGTGATTCAA GTGGGAGTTT TTAGCGATCG CAGTAATGCC GATGAAATGC TAAGAGTTCT CAATAGTAGT GGCTTAAGAA CCATTGTAGA GCCATTAAAT TGA
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Protein sequence | MPPVAEQMPL SERTMSQVNV LFVNPSAGDD TVGNGGENTP LRTITQALKL ASPGTVIKLT PGNYSVETGE TFPLMLKPGV SIQGNTSNKG QEVKIQGGGL FLSRSFGGQN VAIVGANQAS LTGVTITNTN PRGYGLWVES SNPVISENTF TGNTQDGISV TGNSATTITK NYFYRNGANG ITIGGNSPAQ VRENVFEETG FGINVAQNAV PMLVSNQIQN NRAGIIVQAN ARPILRNNLI QGSKEDGVVA IAQAMPDLGN ATESGGNEFR NNARHDINAS AAKQAIAAVG NTIDSKRITG KVALNAQDAP VANNAPPTAV SNRALPTIPN EREVIFTAPS VSNTTNRPSK SVVRSQGNSQ LPTLVSADAP LTVPRYNRQP PAPIPERVTN QNIPGNIPTT STTNLPPVAT TRTQTAQLNY VQIDPNTIEF VAPQTEQPEQ IVNTQAPPLN VPPQSRVSDT SILPVPAGNI PLGDTRNLPK IAAPQANTTG FGGNYLSATS GNSVRYRVVV EATNDREQEL VKFLAPGAFS TFWQGRRVIQ VGVFSDRSNA DEMLRVLNSS GLRTIVEPLN
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