Gene Ava_5034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5034 
Symbol 
ID3678890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6323683 
End bp6324276 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content46% 
IMG OID637720394 
Producthypothetical protein 
Protein accessionYP_325526 
Protein GI75911230 
COG category[S] Function unknown 
COG ID[COG3224] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.289652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAATC CTATGTTCGA TGAACCATTA GCAAGCAATA CCAGTGAAGA AAGCTATCCA 
GTCACAGCAG TGATCTCTCA TGTAGTGAAA TCGGGGCGCG AGCAAGGTTA CGAAGCATGG
TTTCACGGTA TCGCCGCAGA TGCACGAAAA TTCAAGGGAC ATCTGGGTGT CAGCACTATT
CGACCCCAGG ATCACACCCA TCTTGAATAT GTGGTCATTC TCAGGTTCGA TTGCTACGAC
AATCTCAAAA CCTGGCTAGA ATCTGATATT CGGCGAGAGT GGATTGAGCG ATTGCAGCCC
TTGATTGAAA AGCCTGAAAC AGTTCAAACA CTAACCGGAT TGGAAACCTG GTTTACTCTT
TCAGACAGGC CGATGAAGTC TCCACCACCC CGCTACAAAA TGATGTTAGT AACGTGGTTG
GCAGTGTTCT TAACTCTCCC TATGCTCAAT CGTTTGCTAG CACCGTTGTT GTCTGGCTTG
CCTGTATTGC TCAATCAATT GATTAGTACA GGAATCGGTG TCGCCCTACT CACCTACGTG
ATCATGCCGC GCCTAACACA ATTATTTCGC AAATGGCTGT ATCCTACTCC ATAA
 
Protein sequence
MLNPMFDEPL ASNTSEESYP VTAVISHVVK SGREQGYEAW FHGIAADARK FKGHLGVSTI 
RPQDHTHLEY VVILRFDCYD NLKTWLESDI RREWIERLQP LIEKPETVQT LTGLETWFTL
SDRPMKSPPP RYKMMLVTWL AVFLTLPMLN RLLAPLLSGL PVLLNQLIST GIGVALLTYV
IMPRLTQLFR KWLYPTP