| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5032 |
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| Symbol | |
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| ID | 3678888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 6319113 |
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| End bp | 6322685 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637720392 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_325524 |
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| Protein GI | 75911228 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.234505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGGAA TTGTCCTATC GCCTCACGGA TGGCAGAGGT TTCAAGCAGC AAAGCAAAAA
GCAGAATCTC AGGAAACTTG GGGCAAAAGG TTCACTCAGG AAGATTTGAG CGATCGCACC
AGACTATCAC TCAATACCCT CGCCCGTATT TTTAAACGTG AACTCGGAGT TGATCGCCAG
TCATTAGAGC TTCTTTTCCA GGCGTTTGGG ATGGAATTAA CCCAGACTGA TTATGTAACC
CCGATTACAT CTGGAGCAGA ATCAGCAAGT CATTGGACAA ATCCTCAACA AGACTGGGAT
AACGCGGTCG ATGCCTCGGT GTTTTATGGT CGTGAGGCGG AGTTAGCACA ACTGTGGCAG
TGGATAGTGA CTGAACGCTG TCGCGTGGTT GGGCTACTAG GAATTGGAGG GATTGGCAAA
AGTACGATCG CCGTAAAAGC AGCCCTGCAA ATGCAGACAG AATTTGAAAT TGTGGTCTGG
CGATCGCTGG CTAATGCACC TTCACTAGAT GAACTCCTGA CCAGCCTGCT GAAATTTTTC
ATGCCACTTC AGGGTGATGA TCCCATCATC CCTGCCACTC TCGAAGAAAA GCTTTCTCTA
TTGATGCAGT ATTTGCGCTC CCAGCAATGT CTGTTGATTT TAGATAACAC TGAAACCATT
CTGCACAGTG AACAAGCAGG TCAATGGCGC TCAGGTTATG AAGCTTATGG ACAACTTTTA
AGAACTCTCG GTGAAACGCC CCACCAAAGT TGTTGCTTGC TAACCAGCCG TGAGAAACCA
CAGGAAATGG CATTAATGGA AAGCGCCCAG GGTAGAGTGC GATCGCTATC CTTAAGTGGA
CTCACACCCG ATGATGGCCG CGCCATCTTT CGAGAAAAGG GAGAATTTAC AGCTTCAGAA
GCTCAGTGGC AAACGCTAAT TAATCACTAT GGAGGCAATC CCCTGGCGCT GAAGATGGTG
GCAGCCGCTA CCCAGGATGT ATTCAACGGC AGCATTGCTG AGTTTTTAGC CTACATCAGT
CAGGGAATTT TCATCTTTGA AGACATCCGT AATTTACTTG ATCGTCAGTT TAATCGCCTA
TCGCCAGGGG AGCAGAAAAT ATTGTACTGG TTTGCCATTT ACCGAGAACC AGTAGCGATC
GCAGAGATTA TTCACAATGT CGTCGGTTCA GCCGCCGGGC AAAGCGTTCC CCAACAGGTA
AACTCACTAC TGAGGCGATC GCTCATCGAA AAAATAGATG GGTTATTTTT CTTACAGCCT
GTTGTCATGG AATATGTCAC AGAACGATTG ATTCAACAGG TCTGCACAGA ATTTGCAACT
CGGCAGCTTG ATGTATTGCA AAGCCATTCA TTGATTCTGG TACAAGCAAA GGATTATATC
CGAGAGATTC AACTGCGATT AATCATGCAG CCTGTGGTGG AATGGCTTTT ATCTTGTTAC
AGAAATCTGT CAGAGGTTGA GGACAGAGCC AGGCAATTAT TGGCACAGCA GCGACAGCCA
TCAAGACATA GGGCAGGATA TGCCGTAGGT AATTTGATCA ATCTTCTAGT GCAGATGAAA
GTGGATTTGC GTGGCTCTGA CTTTTCTGAA CTCGTAGTAC AGCAAGCCGA CCTGCGCCAG
GTCAACTTAG CAGGAGTCAA TTTTCAAAAT GCAGATTTAA CCAAGTCCAT TTTTTCAGAA
AGCTTAAATA GTGCCATGTC CATCGACATC AGCCCAGACG GTGAGACTGT TGCCGTTGGC
GATTCAACTG GACTGATCTA TCTCTGGCAG ATCACTACAA CTAAACTATT AGCTACCTTT
GAAGGTCATA CAAGCTGGGT ATGGAGCGTT GCCTTTAGTC CCGATGGTCA CAAGTTAGCC
AGTAGCGGTA GTGATACTTC GATACGGTTG TGGGATGTCC AAAGCGGACA GTGCTTACGG
GTTTTAACAG AGCATACAGG CTGTGTTTGG TCAGTGAACT TTAGTCCCGA TGGTCAACGG
TTGGCTAGTG GCAGTGACGA TCAAACGGTG AGAGTTTGGA ATTTACAAGG AGATTGTCTT
CAGGTTTTAA AGGGACATAC AAAAAACGTT TACTCAGTTC ACTTCTCGCC TGATCATCAA
ACCTTAGCAA GTGGCAGCAA AGACGAGTCT ATTCGCATTT GGAACGTAAT CGATGGGAAC
TGTCTCAATG TGTTGCAGGG ACATACTGAA GGCGTTCATT GTGTACGTTA CAGTCCTGAT
GGTCAACTGC TAGCCAGTGG TAGTTTTGGT GGGTCGATTC GACTCTGGAG TGGGCAACTT
CACACCAACG CCTATCAATC AAAAGTGCTG CATGGACACA CCAATTGGGT TTGGAGCATG
GCATTTAGCC CAGATGGTGG CATTTTGGCG AGTGGAAGTG ACGATGGTAC TCTCCGCCTT
TGGAACGTCC AAGATGGACA GTGCATCAAC GTTCTAAGCG GTCACACCGA CGATGTTCTG
GCTATTGCCA TTAGAGGGCA GCTAATGGTG AGTGCAAGTC AAGATCAAAC GGTGCGGCTG
TGGAATCTGC ACGGGCAAAG CCTGAAAACA TTGCGCGGGT GTACCAGTGG AATTCGCTCT
CTCAGCCTCA GTCCAAATGG TAAAACCCTT GCTAGTAGAG GGCAGGATGA AACAATTCAC
CTATGGCATT TGCAGTTCGA TGGCGATTTA TCATCACCCC TTCGCCCTGA CAAAACCTGG
CAAAGAGTGA CTGATACAAC TGCTGGTTTA ACTAGTTGGA CTTCATATTT AAGCTTTAGC
CCTGATAGCC AAACAGTTGC AACTAATGGG CAGGATGGCT CGATTTTGAT ATGGAATCTG
CAAACGGAAT CTCTCAGTCA ATGGTCAGGT CATGATGCGC CCGTGTGGAC AGTAATGTTC
AATCCTAGCG GGAAAACCTT GGCAAGCGGT AGCCACGATC AAACTGTGCG GCTATGGGAT
GTACAAACTC ATCAATGTCT ACAAGTGCTG CGCGGTCATC AGGATGGTGT GCGAGCGATC
GCCTTTGGTA CTGATGGTCA ACGCCTGGCA AGTGGCAGTT CTGACCAAAC CATTCGCCTG
TGGGAGGTGC AAACAGGAGC GTGTCTGGGA GTGTTGCAGG GTCACTCTGG GGGAGTGTTC
ACCTTGGCAT TTACTGCCCA CGATCAGCAG TTAATTAGTG GGAGTTTTGA CCAAACTATT
CGCTTATGGG ATCTCCAGAC AAGAGAGAGC ATACAAATAC TGCGGGGACA TACAGGTGGA
ATCTGGACTA TTGCCATCAG CCCCGACGGT AAAACCTTGG CAAGTGGCAG TGGTGATCAA
ACCGTTCGCC TGTGGAATTT GCAAACAGGA CATTGTCTAC AAGTGTTGCA TGAGCATAGG
AGTTGGGTAA CTTCGGTGAG CTTTAGTTCC AATGGTCAAT TTTTACTGAG TGGCAGCGAC
GATCGCACAA TTAAGGTGTG GGACATAGGG ACAGGACGCT GTATAAAAAC ATTGATAGTG
GATCGGCTGT ATGAGGGCAT GAATATTCAA AGGGCAAAGG GATTAACGAA CGCTCAAAAA
GCAACATTGA AAGCTTTAGG AGCCTTGGTG TAG
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| Protein sequence | MRGIVLSPHG WQRFQAAKQK AESQETWGKR FTQEDLSDRT RLSLNTLARI FKRELGVDRQ
SLELLFQAFG MELTQTDYVT PITSGAESAS HWTNPQQDWD NAVDASVFYG REAELAQLWQ
WIVTERCRVV GLLGIGGIGK STIAVKAALQ MQTEFEIVVW RSLANAPSLD ELLTSLLKFF
MPLQGDDPII PATLEEKLSL LMQYLRSQQC LLILDNTETI LHSEQAGQWR SGYEAYGQLL
RTLGETPHQS CCLLTSREKP QEMALMESAQ GRVRSLSLSG LTPDDGRAIF REKGEFTASE
AQWQTLINHY GGNPLALKMV AAATQDVFNG SIAEFLAYIS QGIFIFEDIR NLLDRQFNRL
SPGEQKILYW FAIYREPVAI AEIIHNVVGS AAGQSVPQQV NSLLRRSLIE KIDGLFFLQP
VVMEYVTERL IQQVCTEFAT RQLDVLQSHS LILVQAKDYI REIQLRLIMQ PVVEWLLSCY
RNLSEVEDRA RQLLAQQRQP SRHRAGYAVG NLINLLVQMK VDLRGSDFSE LVVQQADLRQ
VNLAGVNFQN ADLTKSIFSE SLNSAMSIDI SPDGETVAVG DSTGLIYLWQ ITTTKLLATF
EGHTSWVWSV AFSPDGHKLA SSGSDTSIRL WDVQSGQCLR VLTEHTGCVW SVNFSPDGQR
LASGSDDQTV RVWNLQGDCL QVLKGHTKNV YSVHFSPDHQ TLASGSKDES IRIWNVIDGN
CLNVLQGHTE GVHCVRYSPD GQLLASGSFG GSIRLWSGQL HTNAYQSKVL HGHTNWVWSM
AFSPDGGILA SGSDDGTLRL WNVQDGQCIN VLSGHTDDVL AIAIRGQLMV SASQDQTVRL
WNLHGQSLKT LRGCTSGIRS LSLSPNGKTL ASRGQDETIH LWHLQFDGDL SSPLRPDKTW
QRVTDTTAGL TSWTSYLSFS PDSQTVATNG QDGSILIWNL QTESLSQWSG HDAPVWTVMF
NPSGKTLASG SHDQTVRLWD VQTHQCLQVL RGHQDGVRAI AFGTDGQRLA SGSSDQTIRL
WEVQTGACLG VLQGHSGGVF TLAFTAHDQQ LISGSFDQTI RLWDLQTRES IQILRGHTGG
IWTIAISPDG KTLASGSGDQ TVRLWNLQTG HCLQVLHEHR SWVTSVSFSS NGQFLLSGSD
DRTIKVWDIG TGRCIKTLIV DRLYEGMNIQ RAKGLTNAQK ATLKALGALV
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