Gene Ava_5019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5019 
Symbol 
ID3679032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6307165 
End bp6308127 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content45% 
IMG OID637720379 
Productcysteine synthase 
Protein accessionYP_325511 
Protein GI75911215 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0961303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.164924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CCAGAAATAT TACAGAGCTA GTTGGACGCA CGCCATTGGT GCGGTTAAAT 
AATATTCCTC AAGCAGAGGG ATCTGTAGCC GATATAGTGG TGAAGTTAGA AAGCATGAAC
CCATCTGCGT CGGTGAAAGA CAGAATTGGC GTAAGTATGG TGGAAAGTGC AGAAGAGGCA
GGTCTAATTC ATCCAGGTAA GACAATATTA GTAGAACCAA CTTCAGGAAA TACGGGTATT
GCTTTGGCAA TGGTGGCTGC TGCTAAAGGC TATCATTTGA TTCTGACCAT GCCGGAGACG
ATGAGTACAG AAAGACGGTC GATGTTGCGA GCTTATGGCG CACAGTTGGA ATTAACTCCA
GGTCTGGAAG GGATGCGGGG AGCGATCGCC AGAGCCGAGC AGATTGTAAC AGAATTGCCT
AATGCCTATA TGTTGCAACA GTTCCGTAAC CCAGCGAATC CCAAAGTACA TCGTCAAACT
ACTGCTGAAG AAATTTGGTC AGATACCGAT GGACAGGTAG ATATTGTGGT GGGTGGAGTC
GGGACTGGCG GAACATTAAC TGGAGTCGCT CAGGTACTTA AAGAACGTAA ACCCAGTTTT
CAAGCTATTG CTGTAGAACC AAGCAATAGC CAAGTGCTTT CCGGAGGAAA ATCAGGAGCG
CATAAAATTC AAGGTATCGG TGCAGGATTT ATCCCGGCAA TTTGTCGTCT GGAATTGATT
GATCAGATAA TTGCCGTTTC GGATGAGGAT GCGATCGCCT ATAGTCGCAG ATTAGCAAGA
GAAGAAGGTT TATTATCAGG TATCTCTACA GGTGCAGCGT TGTATGCAGC TATTCAGGTG
GCAAAGCGTC CAGAAAATAG CGGTAAGTTG ATTGTTATGG TTCAACCTAG TTTTGGCGAA
CGCTATTTGA GTACCACGTT GTTCAAGGAT TTATCAGAGT TGGAAATATC TGCACTCAAT
TAA
 
Protein sequence
MKIARNITEL VGRTPLVRLN NIPQAEGSVA DIVVKLESMN PSASVKDRIG VSMVESAEEA 
GLIHPGKTIL VEPTSGNTGI ALAMVAAAKG YHLILTMPET MSTERRSMLR AYGAQLELTP
GLEGMRGAIA RAEQIVTELP NAYMLQQFRN PANPKVHRQT TAEEIWSDTD GQVDIVVGGV
GTGGTLTGVA QVLKERKPSF QAIAVEPSNS QVLSGGKSGA HKIQGIGAGF IPAICRLELI
DQIIAVSDED AIAYSRRLAR EEGLLSGIST GAALYAAIQV AKRPENSGKL IVMVQPSFGE
RYLSTTLFKD LSELEISALN