| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5012 |
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| Symbol | |
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| ID | 3679025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 6300326 |
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| End bp | 6301435 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637720372 |
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| Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
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| Protein accession | YP_325504 |
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| Protein GI | 75911208 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0114898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.178041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAAT TAATAAAAGA TTTTGCAAAT ATATCTCAAG CGTGGACAAG TAAACGCACT
ACTCGTCGTC ACGCCTTATT TGCCTTTGGC TGTAGCCTAG TATTGTCTAC CACACTATTT
AGTTGCAGTC CTTCACAAAA TAATAACCAG CAACAAGCAT CTTCTTCCGC ATCTAATGTA
GCAAATACAA ATGCTACTAA TAAAGTGGTG AGGATTGTCC GTTCCAAACA ATTGACAGCT
TTAGCGGTTC TAGAACAAAA ACGTATTCTA GAAGAGCGAC TAAAACCTTT AGGTTACAAA
GTAGAATGGC CTGAATTTGC TGCTGGCCCT CAGCAATTAG AAGCTTTGAA TACAGGCGCA
CTGGATATTG CTTCAACTGC TGAATCACCT CCTATCTTTT CCCAAGCAGC AGGGACACCT
CTAGTTTATT TAGCTGCTAA TTCTTCTGAT GGTAAAGCAG TGTCGCTATT AGTTCCTGCT
AACTCTAATG TTAAAAGTGT TAAAGACTTA AAAGGCAAGA AAATTGCTTC TCAAAAAGCA
TCTATCGGTC ACTATCTTAT AGTCAGAGCT GTAGAAAGAG AAGGTTTAAA ACTGAGTGAT
ATACAGCCAG TTTATCTACC ACCTCCGGAC GCAAATGTGG CATTTAGCCA AGGTAAAGTG
GATGCTTGGT TTATTTGGGA ACCATTTGTG ACTAGAAATG TACAACAGAA GGTTGGCAGA
GTTTTAACAG ATGGTGGTAA TGGTTTACGG GATACTAACA ACTATGTCTC TACAACCCGT
AAGTTTTATC AAGAAAATCC AGAGTTAATC AAAATATTTC TGGAAGAACT GCAAAAAGCC
CAAAATTGGG CAAAAAATAA CCCCAAAGAA CTGGCTAACT TACTTGCTCA AACTACTCAA
CTTGACCCGC CTACATTAGA AATTATGCAC AGTAAGTATG ATTTCACACT CATACCAATT
ACTGAACAAA TTATTAACAA ACAGCAGGAA GTTGCTGACA AATGGTACCG TTTAGGGCTG
ATACCAAGAA AGGTGAATGT CAGAGATGGC TTTTTAACTC CAGAACAATA TGCGGAAATT
ACTCCCCAGG AAGTGCTGGC AAAAAAATAG
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| Protein sequence | MSQLIKDFAN ISQAWTSKRT TRRHALFAFG CSLVLSTTLF SCSPSQNNNQ QQASSSASNV
ANTNATNKVV RIVRSKQLTA LAVLEQKRIL EERLKPLGYK VEWPEFAAGP QQLEALNTGA
LDIASTAESP PIFSQAAGTP LVYLAANSSD GKAVSLLVPA NSNVKSVKDL KGKKIASQKA
SIGHYLIVRA VEREGLKLSD IQPVYLPPPD ANVAFSQGKV DAWFIWEPFV TRNVQQKVGR
VLTDGGNGLR DTNNYVSTTR KFYQENPELI KIFLEELQKA QNWAKNNPKE LANLLAQTTQ
LDPPTLEIMH SKYDFTLIPI TEQIINKQQE VADKWYRLGL IPRKVNVRDG FLTPEQYAEI
TPQEVLAKK
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