Gene Ava_4980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4980 
Symbol 
ID3679089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6262086 
End bp6262472 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content48% 
IMG OID637720338 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_325472 
Protein GI75911176 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3409] Putative peptidoglycan-binding domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACA CTAATGCTCA AGAAGCCTCT AAAGTTGCGG AACCTCTACT CCGCCAAGGT 
GACTCTGGTG CGGCTGTGAC TGAATTACAA CGGTTGCTGA ATGCCAAGGG TGTAAAGGTA
TCAGTTGATG GGATCTTTGG TGCAGGAACC CAAGCCGCAG TGGTCAAATT TCAGCGCGCC
AACGGTCTGA CTGCTGACGG AATTGTTGGC TCAAAAACTT GGGTAGCTTT ACGAAAGGTT
CCTACTCCCA CAATTCGTTT AGTAGATGTT GCTCTCAACT ACGACCCAAC CCAATTTCCC
CATCAAGTAT CTGCTTTGGA ATGGCTGCAA AGTCAAATTC CCGCAGCTAC ACTCAATGAA
TTTGCTCGTC GTTGGCGGAA TCAGTAG
 
Protein sequence
MTNTNAQEAS KVAEPLLRQG DSGAAVTELQ RLLNAKGVKV SVDGIFGAGT QAAVVKFQRA 
NGLTADGIVG SKTWVALRKV PTPTIRLVDV ALNYDPTQFP HQVSALEWLQ SQIPAATLNE
FARRWRNQ