Gene Ava_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4955 
Symbol 
ID3679064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6233462 
End bp6234502 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content38% 
IMG OID637720313 
ProductL-threonine aldolase 
Protein accessionYP_325447 
Protein GI75911151 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATA GCAACTTAGA ACAGTTTGCC AGTGACAATT ACGCGGGTAT TTGTCCAGAA 
GCAATGGACT ACATGATTAA AGCTAATCAA GGTAGTGCGC CAGCTTATGG AAATGATGAA
TGGACACAAA AAGCAGCAGA CTATTTTCGA GAACTTTTTG AAATTGATTG CGAAGTATTT
TTTACTTTTA ACGGTACAGC TGCAAATTCA TTATCTTTAG CTGCGCTTTG TCAGTCATAT
CACAGCGTGA TTTGTCATGA GACAGCACAT ATAGAAACAG ATGAATGTGG CGCACCAGAG
TTTGCTTCTA ATGGTTCTAA GCTGTTACTC GCTAAAGGCG AAAATGGTAA GTTAACACCA
CAGGAGATAG AGTCTGTAAT CACGAAACGG GCTGATATTC ATTATCCTAA ACCAAAAGTT
ATTAGTATTA CTCAAGCTAC AGAATTAGGA ACTTTGTATT CTATAGAAGA ACTTTTAGCT
ATTAAAGAAG TTGCCCACAA GTATCAATTA AAAATTCACA TGGACGGCGC GCGCTTTGCC
AATTCAGTCG CAGCCATGAA TAAAAGTCCA GCAGAGATGA GTTGGAAAAG TGGTGTGGAT
GTATTGTGTT TTTGCGGGAC AAAAAATGGT ATGGCATTAG GGGAAGCAAT TATATTTTTT
AACCGAGCCT TGGCAGAAGA CTTTGATTAT CGTTGCAAAC AAGCGGGACA ATTAGCATCA
AAAATGCGGT TTATTTCTGC GCCGTGGTTA GGTTTGTTAG AAACTGGCGC GTGGTTAAAA
AATGCTCGAT ACGCGAATCA ATGTGCGGCT TATTTAGAGA ATGAATTGTT AAAGATAGAA
GGTGTGGAAA TTATGTTTCC CCGTGAAGCT AATGCAGTTT TTGTTAAACT GCCAGAGCAA
GTTATTAATG ACTTAAAAGC AAAAAATTGG CTATTTTATA CTTTCATAGG GGTGGGTGGC
GTACGCTTTA TGTGTTCTTG GAATACTACC AAAGGCAGAA TTGATGAATT GATTGGAGAT
ATTAAAACAG GATTGGGCTA A
 
Protein sequence
MINSNLEQFA SDNYAGICPE AMDYMIKANQ GSAPAYGNDE WTQKAADYFR ELFEIDCEVF 
FTFNGTAANS LSLAALCQSY HSVICHETAH IETDECGAPE FASNGSKLLL AKGENGKLTP
QEIESVITKR ADIHYPKPKV ISITQATELG TLYSIEELLA IKEVAHKYQL KIHMDGARFA
NSVAAMNKSP AEMSWKSGVD VLCFCGTKNG MALGEAIIFF NRALAEDFDY RCKQAGQLAS
KMRFISAPWL GLLETGAWLK NARYANQCAA YLENELLKIE GVEIMFPREA NAVFVKLPEQ
VINDLKAKNW LFYTFIGVGG VRFMCSWNTT KGRIDELIGD IKTGLG