Gene Ava_4936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4936 
SymbolleuS 
ID3679123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6205668 
End bp6208286 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content45% 
IMG OID637720294 
Productleucyl-tRNA synthetase 
Protein accessionYP_325428 
Protein GI75911132 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.130078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTCCC GATACAACCC CGCAATACTT GAGGAAAAAT GGCAAAAAAC ATGGGTAGAA 
CTTGGTTTAG ATAAGACCCA AACACAAAGC AATAAACCAA AATTCTACGC TCTATCCATG
TTTCCCTATC CATCGGGCAG CCTACACATG GGTCACGTCC GTAATTACAC AATTACAGAT
GTGATTGCCC GCCTCAAACG AATGCAAGGG TATCGGGTAC TGCATCCAAT GGGATGGGAT
GCCTTTGGCT TACCAGCAGA AAACGCCGCC ATTGACCGTG GTGTACCTCC TGCCAACTGG
ACTTATCAAA ACATTACCCA AATGCGGCAA CAATTGCAGC GTCTTGGTTT ATCTATTGAC
TGGGATAGCG AAGTTGCCAC CTGTTCGCCA GACTATTACA AATGGACACA GTGGATTTTC
TTACAGTTCT TGCAAGCGGG GTTAGCTTAC CAAAAAGAAG CAGCCGTCAA CTGGGACCCC
ATTGACCAAA CCGTATTGGC AAACGAGCAG GTTGATAACG AAGGTCGTTC TTGGCGCAGT
GGCGCGATCG TTGAGCGTAA ATTGCTCAGG CAGTGGTTTT TAAAGATTAC CGACTACGCT
GAAGAATTAT TAAACGACTT AGATAAATTG ACCGGTTGGC CAGAACGCGT CAAATTGATG
CAGGCGAACT GGATAGGGAA ATCTGTAGGC GCATATTTAG AATTTCCCAT TGTCGGCAGC
ACTGAGAAAA TTGCTGTGTA TACCACCCGG CCTGATACAG TTTACGGTGT TAGCTATGTA
GTATTGGCAC CAGAACACCC CCTCACCAAA CAAGTCACCA GCAAAACTCA ACAAGCAGTA
GTAGACACCT TTATTCAAGA GGTGACAAAT CAAAGCGAGT TGGAACGTAC CGCCGAAGAT
AAACCTAAAC GCGGTGTAGC AACCGGCGGT AAGGCAATCA ACCCGTTTAC AGGGGAAGAA
GTACCCATTT GGATTGCCGA CTATGTACTG TACGAGTATG GTACTGGGGC TGTGATGGGT
GTACCTGCCC ATGATGTACG GGATTTTAAA TTTGCTCAGA GATATGATTT ACCCATTGAT
TTTGTCATTG CAGCCCCTGA TGATGTAGCA GGTTTTGACT TAAGCCCGAC ATCAGAGACA
GAAGAAGTCA CACAAGTCGT GCAAATAGAA TATAACCAAG CATACACAGA GCCAGGAATC
TTAATTAATT CCGGGGCTTT TACTGGTATG ACTTCCACAG ATGCCAAGCA AGCGATTGTG
AAATATGCCA CAGAAAAAGG TTTTGGCAAA GAACGTATTC AATATCGCTT GCGGGACTGG
TTGATTTCTC GGCAACGTTA TTGGGGCGCA CCAATTCCTG TAATTCATTG TCCCAACTGT
GGGATAGTAC CAGTGCCAGA CAAAGATTTG CCAGTTATCT TACCAGAAGA AGTGGAATTT
ACTGGACGTG GTGGTTCACC GTTGGCACAG TTGGAAAGCT GGGTAAATGT GCCTTGTCCT
ACCTGTGGTA GTCCTGCCAA ACGGGAAACT GACACGATGG ATACCTTTAT TGATTCCTCG
TGGTATTTCT TGCGGTTTAC TGATGCTAGG AACGAAGCAC AGGTATTTGA ATCAGCAAAA
ACCAATGACT GGATGCCCGT AGACCAATAT GTAGGCGGTA TTGAACACGC GATTTTACAC
TTATTGTATT CCCGGTTTTT TACTAAAGTG CTGCGCGATC GCGGCTTGTT GAACTTTGAT
GAACCTTTTG AACGTTTGTT AACTCAAGGG ATGGTACAAG GTTTAACTTA CTTCAATCCG
AACAAGGGGG GGAAAGATAA GTGGGTTCCT TCCCATTTAG TTAACCCCAA TGACCCTCGT
GACCCCCAAA CAGGTGAACC ATTGCAACGG CTTTATGCCA CCATGTCCAA ATCTAAAGGC
AACGGTGTCG CACCAGAAGA TGTGATTGCT AAATATGGTG TAGACACAGC ACGGATGTTC
ATCTTATTTA AAGCGCCGCC AGAAAAAGAT TTGGAATGGG ATGAAGCTGA TGTAGAAGGA
CAATTCCGCT TTTTAAATCG GGTTTGGCGT TTGGTGACAG ATTATGTTGC ATCTGGGGTC
AACCCTAAAA ATAAATCTGG TGAATTGAGC AAGTCAGAAA AAGATTTACG GCGGGCAATT
CACAGTGCAA TTCAGTCGGT GACAGAAGAT TTAGAGGATG AGTATCAGTT TAATACTGCT
ATTTCTGAGT TGATGAAGTT AAGCAATGCC CTTACTGATG CTAACGGCAA AGATTCACGG
GTCTATGCTG AAGGTATCCA CACATTAGTG GTGTTGCTGG CTCCCTTTGC GCCACATATT
GCTGAAGAAT TGTGGCAACT ATTGGGTAAT AGCGAATCAG TGCATACGCA AACCTGGCCT
GCTTTTGACC CAGCCGCTTT AGTTGCCGAT GAAATCACTT TGGTGATTCA AGTGAATGGT
AAGAAGCGTG CTGATATTCA AGTTCCGTCA CAAGCTGATA AAGCTGAGTT GGAGAAATAC
GCCCGCGAAT CAGAAGTTGT GCAGCGTCAC CTGGAAGGTA AGGAAATTAA AAAGGTAATT
GTCGTACCTG GAAAGTTAGT TAATTTTGTC GTTGGTTAA
 
Protein sequence
MDSRYNPAIL EEKWQKTWVE LGLDKTQTQS NKPKFYALSM FPYPSGSLHM GHVRNYTITD 
VIARLKRMQG YRVLHPMGWD AFGLPAENAA IDRGVPPANW TYQNITQMRQ QLQRLGLSID
WDSEVATCSP DYYKWTQWIF LQFLQAGLAY QKEAAVNWDP IDQTVLANEQ VDNEGRSWRS
GAIVERKLLR QWFLKITDYA EELLNDLDKL TGWPERVKLM QANWIGKSVG AYLEFPIVGS
TEKIAVYTTR PDTVYGVSYV VLAPEHPLTK QVTSKTQQAV VDTFIQEVTN QSELERTAED
KPKRGVATGG KAINPFTGEE VPIWIADYVL YEYGTGAVMG VPAHDVRDFK FAQRYDLPID
FVIAAPDDVA GFDLSPTSET EEVTQVVQIE YNQAYTEPGI LINSGAFTGM TSTDAKQAIV
KYATEKGFGK ERIQYRLRDW LISRQRYWGA PIPVIHCPNC GIVPVPDKDL PVILPEEVEF
TGRGGSPLAQ LESWVNVPCP TCGSPAKRET DTMDTFIDSS WYFLRFTDAR NEAQVFESAK
TNDWMPVDQY VGGIEHAILH LLYSRFFTKV LRDRGLLNFD EPFERLLTQG MVQGLTYFNP
NKGGKDKWVP SHLVNPNDPR DPQTGEPLQR LYATMSKSKG NGVAPEDVIA KYGVDTARMF
ILFKAPPEKD LEWDEADVEG QFRFLNRVWR LVTDYVASGV NPKNKSGELS KSEKDLRRAI
HSAIQSVTED LEDEYQFNTA ISELMKLSNA LTDANGKDSR VYAEGIHTLV VLLAPFAPHI
AEELWQLLGN SESVHTQTWP AFDPAALVAD EITLVIQVNG KKRADIQVPS QADKAELEKY
ARESEVVQRH LEGKEIKKVI VVPGKLVNFV VG