Gene Ava_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4900 
Symbol 
ID3679185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6168967 
End bp6171975 
Gene Length3009 bp 
Protein Length1002 aa 
Translation table11 
GC content45% 
IMG OID637720258 
ProductATPase, E1-E2 type 
Protein accessionYP_325392 
Protein GI75911096 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.21628e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTCAAG CAATACATAC CAGTGTCAAA GGGAGAGCTA GATATAAGGT AAAAGAACTT 
TATCATTCCC TATCTCTCAA GGAATATTTG GAGCGATCGC TTGTCAATCA ACCAGAAATA
ATTGATGTTT CTGCTAATAT CTCTACAGGT AATGTGCTTG TATTTTTTTC ACCAAAATAT
AATTACAAGC AGATTGCCTA TTTGATTGAT GAAGTTATCT TAAATTACCA AAAAAGTAAT
CAGCAAGTCC AGCCATTTAC ATCTCACAAA ATTGTTAAGA AAACTCAACG AATAAGTGGT
GTTAAGCAAC AAAAGATAGA GAATTGGCAT CTTATGCCGG CAAGTACAGT TGTGGATACC
TTCAACACCT CTGCATTAGG GTTATCCAGT GAGTCTGCTG CCGCTAATTT GCGTAAATAT
GGGGCGAATG TGCTTTCAGA AACGGAGGTA CGTTCTAGTT TAAGTATCTT GGTTGACCAG
TTCAAGTCTT TACCTGTGGC TTTGCTGGGT GTGGCGGCTG GGGTGTCGGT TTTTACTGGA
GGGTTGATTG ATGCTGTAGT TATTTTGGGT GTGGTTGGTG TAAATGCGGT GATTGGCTAC
GCTACAGAAA CTCAGTCAGA ACGCATCATT CACTCTCTCA AGCATCAAGA ACAAACGTCG
GCTTGGGTGA TGCGAGATGG CAAGGCGCAG GAAATTCCTG TAGATAATGT AGTTTTGGGC
GATGTTTTAA TTCTCAAACC GGGTAGCTAT GTAGCAGCAG ATGCCAGACT GATTGAGGCA
GATAATTTAA GTATTGATGA ATCGGCCTTA ACTGGTGAAA GTCTCCCTGT CAGTAAAAAT
ACGGCATCTT TGACAGGTGA GGATGTACCA TTAGGCGATC GCCTAAATAT GATTTATCGG
GGGACTTATA TCACCGGGGG TCAAGGATTG GCGGTGGTTG TAGCCACTGG GCAGTTTACG
GAAATGGGAC ACATCCAAAC TCTGGTAGGT GCAGCCAATG CTACAGAAAC ACCCCTGGCC
AGACAACTAG ACCAGGTGGG GAGTCAATTG GTAGTGATTG GGATGGGTCT TTGTGGTCTG
GTGTTTGGGA TGGGGGTGAT GCGGGGATAT GGTTTGGTGC AGATGTTGAA ATCATCCATA
TCCTTGGCTG TGGCAGCCGT TCCCGAAGGT TTACCAACAA TTGCCACCAC AACCTTAGCC
TTGGGTATCC GTGATATGCG GCGAAACAAA GTCCTTGTCC GTAGTTTGAG TGCGGTGGAG
GCTTTGGGTT CTGTGCAGAC AATTTGCCTG GATAAAACCG GGACAATTAC GGAAAATAAA
ATGTCGGTGG TGGAAATTCA CACCAACACG CGAGAAATTA AAGTTACAAA TGGGGAGTTC
ATCGCTGGGA CAGGAAATAT TAACCCCTAT ATGTATGATG AACTGTTAAA GCTGATTCAT
GTCTCGGTTT TGTGTAATGA AAGTGAAGTG AGTCGTGTCG ATGGTGAGTA TGTAGTCACA
GGTTCGGCGA CAGAAAACGC CTTAATTTAC ATGGGAATTG CGGCGGGGGT GGATGCGATC
GCCATAAAAC AGAAGTATCC TTTACTACAA ACGAATCTAC GTTCCGAAAA CCGCAATATT
ATGAGTACCA TCCACGAGAC TCATAACGGA CATAAATTTG TCGCCGTCAA AGGTAGCCCC
AGCGAAGTGG TGCAGATGTG CCAAGGGTGG ATGAAGGATG GGGAGGTAGT GCCTTTAACC
GATGCAGACC GACAAATGTT GGAAATAGAA AATGATCGTA TGGCGGGTAA AGCTTTGCGG
GTGTTGGGTG TAGCCTACAA CCATATAGAT GAATCCCACA ACGGCAACCA TGAAACAGAT
TTGATTTGGT TGGGTTTAGT AGGGATGGCA GACCCAATTA GAAGGGGTGC CAAAGCATTA
ATTGCCGACT TCCATCACGC CGGCATTGAT ACCGTCATGA TCACAGGTGA TCAAAGTCCC
ACAGCTTATG CGATCGCTAA AGAATTAGAA TTGAACCGTG ATACTCAACT AGAAATTCTC
GACTCCAGCA ACCTCAACAA TCTCACCCCA GAAGCCTTAA CTGCCCTCAG CGACAAAGTA
GATGTATTTG CCCGTATCAG TCCCAGTAAT AAATTGCAAG TAGTCCAAGC TTTGCAAGGT
GCAGGTAAAG TCGTCGCCAT GACTGGTGAT GGCATTAACG ATGCCCCCGC CTTAAAAGCT
GCCCAAGTTG GTGTGGCAAT GGGTAAAGGG GGAACCGATG TCGCCCGTGA AGTAGCAGAT
ATTGTCCTGG AAGACGACAG ACTGGAAACC ATGATTATCG CCGTTAGTCG GGGACGAACG
ATATACAACA ACATTCGTAA ATCTGTGCAT TTCCTCCTAG CGACCAACCT CAGCGAAATC
ATGGTCATGA CCACCGCCAC CGCCGTAGGT ATTGGCGAAC CCTTGAATGC AATTCAACTA
CTCTGGCTGA ACTTAGTTAC AGATATATTC CCTGGCTTAT CCCTAGCGAT GGAAGCCCCA
GAACCAGAGG TATTAAGTCA ACCACCCCGC AACCCAGCAG ACCCAATTAT CAAAAAATCC
GATTTTGGCA GAATCACCTT TGAGTCCGCC ACCATATCTG CAAGTACCCT AGCCGCATAC
GGTTACGGCA TCCTCAAATA TGGTATTAGT CCCCAAGCCA GTACCATCGC CTTCATGGGT
TTAACCACAG CCCAACTACT ACATACAATT AGTAGCCGTT CCGAAAAACA CAGCATATTT
AGTCCAGAAA AACTCCCACA TAACCCTTAT CTCACGGCGG CGGTTACAGG TTCCTTTGGG
CTGCAACTAT TAGCTGTAGC CGTCCCACCC CTGAGAACTT TATTAAAGAT TACCCCAATT
AATCTGGTTG ATGGTGCGGT AATTGGTGGT AGTGCCTTAC TACCCCTGAT TGTGAACGAA
GCAACCAAAA ATACTGGCGC AAGCAAGATA AAAAAATATC CAAAATGTAG GGTGCGTCAG
TATAAATAA
 
Protein sequence
MIQAIHTSVK GRARYKVKEL YHSLSLKEYL ERSLVNQPEI IDVSANISTG NVLVFFSPKY 
NYKQIAYLID EVILNYQKSN QQVQPFTSHK IVKKTQRISG VKQQKIENWH LMPASTVVDT
FNTSALGLSS ESAAANLRKY GANVLSETEV RSSLSILVDQ FKSLPVALLG VAAGVSVFTG
GLIDAVVILG VVGVNAVIGY ATETQSERII HSLKHQEQTS AWVMRDGKAQ EIPVDNVVLG
DVLILKPGSY VAADARLIEA DNLSIDESAL TGESLPVSKN TASLTGEDVP LGDRLNMIYR
GTYITGGQGL AVVVATGQFT EMGHIQTLVG AANATETPLA RQLDQVGSQL VVIGMGLCGL
VFGMGVMRGY GLVQMLKSSI SLAVAAVPEG LPTIATTTLA LGIRDMRRNK VLVRSLSAVE
ALGSVQTICL DKTGTITENK MSVVEIHTNT REIKVTNGEF IAGTGNINPY MYDELLKLIH
VSVLCNESEV SRVDGEYVVT GSATENALIY MGIAAGVDAI AIKQKYPLLQ TNLRSENRNI
MSTIHETHNG HKFVAVKGSP SEVVQMCQGW MKDGEVVPLT DADRQMLEIE NDRMAGKALR
VLGVAYNHID ESHNGNHETD LIWLGLVGMA DPIRRGAKAL IADFHHAGID TVMITGDQSP
TAYAIAKELE LNRDTQLEIL DSSNLNNLTP EALTALSDKV DVFARISPSN KLQVVQALQG
AGKVVAMTGD GINDAPALKA AQVGVAMGKG GTDVAREVAD IVLEDDRLET MIIAVSRGRT
IYNNIRKSVH FLLATNLSEI MVMTTATAVG IGEPLNAIQL LWLNLVTDIF PGLSLAMEAP
EPEVLSQPPR NPADPIIKKS DFGRITFESA TISASTLAAY GYGILKYGIS PQASTIAFMG
LTTAQLLHTI SSRSEKHSIF SPEKLPHNPY LTAAVTGSFG LQLLAVAVPP LRTLLKITPI
NLVDGAVIGG SALLPLIVNE ATKNTGASKI KKYPKCRVRQ YK