Gene Ava_4894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4894 
Symbol 
ID3679179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6162385 
End bp6162855 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content37% 
IMG OID637720252 
ProductTPR repeat-containing protein 
Protein accessionYP_325386 
Protein GI75911090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00964612 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTCTT CATCAATCAA TTCTTTACTT GAAGATTTGA AACATTCTGA TGCTTTAGTT 
CGGGAACAAG CAACAAAAAA ACTCTGGCGG ATTTGGTTTC AACAAAAGGG AATGTATGGG
TTGGAGAAAA TTGATCAGAG TCAAAAATTA CTGGATGCTG GGGAAATTAC TGAAGCTGAA
GTAATGCTCA CACAATTAAT CCAAGAACAA CCAGATTTTG CGGAGGCTTG GAATCGACGG
GCTTTTCTCT ATTACAGTAT GGGAGAATAT CAAAAATCTC TGGCTGATTG TCAAATGGTC
ATTCAAATTA ATCCAGTGCA TTTTGGCGCA CTTCATGGTA TCGGTTTATG TTATGCGGCA
CTAGGTAAGT ATGCTAAAGC TATCAAAGCT TTTAAACGTG CCTTGGAAAT TCAGCCATAC
TCTTTAGTAA ATCAAAAATT AATTTTAGAA TGTACTTTCC GACTCAGCTA A
 
Protein sequence
MDSSSINSLL EDLKHSDALV REQATKKLWR IWFQQKGMYG LEKIDQSQKL LDAGEITEAE 
VMLTQLIQEQ PDFAEAWNRR AFLYYSMGEY QKSLADCQMV IQINPVHFGA LHGIGLCYAA
LGKYAKAIKA FKRALEIQPY SLVNQKLILE CTFRLS