| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4889 |
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| Symbol | |
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| ID | 3679213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 6155340 |
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| End bp | 6156206 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637720247 |
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| Product | two component AraC family transcriptional regulator |
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| Protein accession | YP_325381 |
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| Protein GI | 75911085 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.298891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00503781 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAAACG AATCATCGAA AACAATTCTT GTTATTGAAG ATGATAGCGA TAGTCGCAAT
CTCTTTTTAG CGGTGCTTGA GGCTAGAGGT TTTGATGGTA TAGCGGCTGA AAACGGTGCG
TCTGGTATTC AACAGGCACA AAAATATTTA CCAGATTTGA TTATCTGCGA TATTATGATG
CCTGATATGG ATGGTTACGA TGTTTTAAAT GTGCTGCGCC AAGACCCTTT GACAGCGATT
ATTCCCTTCA TTTTTCTGAC TGGAAACGAT GATAAAGCCG GTCTTCGTAA GGGTATGGAG
TTGGGAGCTG ATGACTATAT TACTAAGCCT TCTACTATAG AGGAAATACT CAAAGCGATC
GCTATCCGTT TAGAAAAGCA AGCTATACTC AGGTATTGGT ATGCGACTAA ATCTCATCAA
CTAACAGAAT CCCTAGCTGT AGACTCTGAA GCAATTTTTC CCTCTACTCC CCAGCTTCAG
GAAGTTTTTG ATTATATTGA AGCTCATTAT CATCAAGGAA TTACATTATC AAATGTGGCT
GTTGCGGTTG GTTATTCACC CGCTTACTTA ACCAGTAGAG TTGCTAGAGA AACGGGAGAT
ACGGTGAACG GCTGGATTTT CAAACGGCGA ATGGCCGCAG CGCGTCCTCT ACTGAGAAAT
ACGAATAAAA CCATCGAACA GATTGCAACA GCGCTGGGTT ATCAAAATGC TTGTCATTTC
TCTCGCCAAT TCCGCCAACA TCACGGTTTA CCTCCCAAAG CTTGGAGAAA ACAACAACAA
TCGCTCCAGT CTGTTAGAAA TCTGAAGCCA CAGCTGATTG ATGTTTGTCC TCAATCGGAA
AAATGCTTAT TGACTGGCCG GAGTTAA
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| Protein sequence | MTNESSKTIL VIEDDSDSRN LFLAVLEARG FDGIAAENGA SGIQQAQKYL PDLIICDIMM
PDMDGYDVLN VLRQDPLTAI IPFIFLTGND DKAGLRKGME LGADDYITKP STIEEILKAI
AIRLEKQAIL RYWYATKSHQ LTESLAVDSE AIFPSTPQLQ EVFDYIEAHY HQGITLSNVA
VAVGYSPAYL TSRVARETGD TVNGWIFKRR MAAARPLLRN TNKTIEQIAT ALGYQNACHF
SRQFRQHHGL PPKAWRKQQQ SLQSVRNLKP QLIDVCPQSE KCLLTGRS
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