Gene Ava_4865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4865 
Symbol 
ID3679286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6131381 
End bp6132865 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content41% 
IMG OID637720223 
Producthypothetical protein 
Protein accessionYP_325357 
Protein GI75911061 
COG category[R] General function prediction only 
COG ID[COG2251] Predicted nuclease (RecB family) 
TIGRFAM ID[TIGR03491] RecB family nuclease, putative, TM0106 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.120137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.12393e-07 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCTAATTA ATGCTGAACA CCTGCTGCAA TACCAACGCT GTAAACGCCG TCCTATTTTA 
GATATTCACG CTGATAGAAG CCAAAGGGAT GCACCTAGTG AATTGTTGCT GAAATTACAA
CAAGATAAAT ATGCTCATCA ACAAAGTATC TTGGCTAAAT TTGTATATCA TCAGCCAGAA
TATCCGAAAA GGAATTGGGA AGCAGGACAA GCAGCCACCA TAGAATTGAT GCAGCGTGGA
GTTGAGTATA TTTATCAGGG AGTATTGTTA GCTAATTACA ACCAATTAAT AGATACAGAT
GATACAAAAT ATACCTGCTT GAGTCGTCCC GATTTGTTAA TCAAACAGCC AGGACAGTCC
AAATTTGGTG ATTGGGTATA TGAACCAGTG GATATAGAAC TGGGTAAGCG TCCCAAACAA
GAATATCAAG TAGTTACAGC CTTCCACACC CAAATTTTGG CAAAAGTACA GGAAGTTCAG
CCCCAGAATG CTTGGTTGAT GTTGCGGGGT AAAGAGACAC CGTATTCAGT AGACTTATTT
AAATGGATAC CCCAGATGCA GGGGATTTTA CGAGAGTTTA TTCAAGACTT AGAGTCAGAT
ACTGCACCAG AAGTATTTAT TTCCCGTCAA AAGTGTAATC TTTGTCTTTG GTACAGTCAA
TGTTATGCGA TCGCTCAATC TGAGCAACAC CTCTCTCTAC TACCTGGCGT GACACCCATC
CGTTACACCC AACTGCAAAT CCTCAACATT ACCAGCGTAG AATCCCTCGC CCATACCAGC
CCAACTATAT TAGAAAATCT CGTAGGTTTT GATTCGCAAG TTGCAGCCAA GTTAGTAGTG
CAAGCCCAAT CAGTTCTACA AAGACAGCCG CTAATTCTGC CATTCCCGCC GCCCAAGGGA
AATCTGATAT TCAACTCCCC TGTAGAAATA TACTTTGATA TTGAAGCCCA GCCAGACTTA
AATTTAGATT ATCTGTTAGG GGTTTTGGTA ATTAACAAAC AAACCAACAC CGAACAATTT
TATTCCTTTG TCGCCGAAAA ACCATCAGAA GAAGAATTAA TTTGGCGACA GTTTCTCGAC
TTAGTATGGC AATATCCCGA AGCCCCAATT TATCATTTTT GTGTGTACGA ATTAGATACA
GTTAAACGCC TAGCCAAGCT ATACCGTACA CCTTACACCT CAGTCAACCC AGTATTATAT
AGATTTGTCG ATATTTATGA ACACCTCACC CAAAGCGTGG CTTTACCTAT AGAGAGTTAT
GCCTTAAAAG CCATTGCGCG CTGGATGGGT TTTGAGTGGC GTGATAAAGA AGCCACTGGT
GCTAAGTGTA TATACTGGTA TGATCAATGG CTAGAAACAG GCGATCGCAC CTTACTAGAA
ATCATTATCC GCTATAACGA AGACGACTGT CGCGCCACCC GCAAAGTCAA AGACTGGCTA
GTCGAATTTG TGCAAGACAA GTATCATTTA CGACGTGTAG GTTAA
 
Protein sequence
MLINAEHLLQ YQRCKRRPIL DIHADRSQRD APSELLLKLQ QDKYAHQQSI LAKFVYHQPE 
YPKRNWEAGQ AATIELMQRG VEYIYQGVLL ANYNQLIDTD DTKYTCLSRP DLLIKQPGQS
KFGDWVYEPV DIELGKRPKQ EYQVVTAFHT QILAKVQEVQ PQNAWLMLRG KETPYSVDLF
KWIPQMQGIL REFIQDLESD TAPEVFISRQ KCNLCLWYSQ CYAIAQSEQH LSLLPGVTPI
RYTQLQILNI TSVESLAHTS PTILENLVGF DSQVAAKLVV QAQSVLQRQP LILPFPPPKG
NLIFNSPVEI YFDIEAQPDL NLDYLLGVLV INKQTNTEQF YSFVAEKPSE EELIWRQFLD
LVWQYPEAPI YHFCVYELDT VKRLAKLYRT PYTSVNPVLY RFVDIYEHLT QSVALPIESY
ALKAIARWMG FEWRDKEATG AKCIYWYDQW LETGDRTLLE IIIRYNEDDC RATRKVKDWL
VEFVQDKYHL RRVG