Gene Ava_4864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4864 
Symbol 
ID3679285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6129977 
End bp6131161 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content33% 
IMG OID637720222 
Producthypothetical protein 
Protein accessionYP_325356 
Protein GI75911060 
COG category[S] Function unknown 
COG ID[COG4222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.019631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.01965e-07 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAATAA TTAGAAAAAA CTTAAATTGG CGAACCTTTA TTTTCTTTAC TATTGGAATT 
TTAATTACCA GCTTATTCTT TACAAATTTA GTTACAGACG CTGTAGAAAT CAGTAGTATA
GAATTTATTG GGCAAGCTAC TTTACCAAAA AGATTATCCT TTCAAAATAC TCCATTAGGT
GGGCTATCAG GTATCACTTA TGATTCTAGT AATGACCTTT ATTACGCTAT TTCTGATGAT
AGGGGACAAA AAGCACCTGC ACGTTTCTAC ACCTTCAAAA TTGATTTAAG TCAAGGTAAA
TTACAAGATA GTAGCGTTGT TCCCGTAGGT GTTACCACTC TATTAAATGA AAATGGTCAA
CCCTTTGTCC CTGGGGAAAC AGATACAGAA GGAATTGCAG TTACTCAAGC AGAAACAGTA
TTCATTTCTT CGGAAGGTGA TGTGGATAAT TTAACCAATC CTTTTATCAA AGAATTTCCT
TTATCATCAG GTAAAGCAAT TAAAAGCCTA CCCATCCCTA AAAAGTTTTT ACCTGATAAA
AATCGAAAAC AAGGTATTCG TAATAATTTA GCCTTTGAAA GTTTAACAAT TACACCTAAT
AATAAATACT TATTTACAGC TACGGAAAAT GCTTTAATTC AAGATGGAGA AGCAGCACAA
CCTAACATTG GTAGCCCTTG CAGAATTTTA CAATATAACT TACAAAATAA TCAACCAGAA
AAAGAATTCC TCTACCAAAC AGAACCCGTA TCAGCTTTTT TAAATTTAAC AGGTAAATTT
GCCAGTGGAT TACCCGATTT AATAGCCTTG GATAATCATG GACACCTTGT AAGTATAGAA
CGTTCCTTTG CTGGTTTAGG ATTTGGTGTT TCTTTATTTC AAGTCTCCCT TGCAGGTGCT
GATAACATCC AAAATCTAAA TAGCTTGCTA ACAATAAACT CCAAAAATAT CAAGCCAGTT
GAGAAAAAAT TGCTCTTAGA TTTAAGAACC TTAGATGTAG CACTAGATAA CATAGAAGGC
TTAACCATTG GGCCTTGGCT ACCTAATGGA CAAAAAGCGT TAATTCTCAT TAGTGATAAT
AATTTCAATT CCATACAACG CAACCAAATC CTCGCCTTTC AACTCAAAAT AGAATCACCT
TTTATCAGGT TATTCCGGCG AATAGTACAA AATTTTAAAC TTTAA
 
Protein sequence
MKIIRKNLNW RTFIFFTIGI LITSLFFTNL VTDAVEISSI EFIGQATLPK RLSFQNTPLG 
GLSGITYDSS NDLYYAISDD RGQKAPARFY TFKIDLSQGK LQDSSVVPVG VTTLLNENGQ
PFVPGETDTE GIAVTQAETV FISSEGDVDN LTNPFIKEFP LSSGKAIKSL PIPKKFLPDK
NRKQGIRNNL AFESLTITPN NKYLFTATEN ALIQDGEAAQ PNIGSPCRIL QYNLQNNQPE
KEFLYQTEPV SAFLNLTGKF ASGLPDLIAL DNHGHLVSIE RSFAGLGFGV SLFQVSLAGA
DNIQNLNSLL TINSKNIKPV EKKLLLDLRT LDVALDNIEG LTIGPWLPNG QKALILISDN
NFNSIQRNQI LAFQLKIESP FIRLFRRIVQ NFKL