Gene Ava_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4843 
Symbol 
ID3679341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6095926 
End bp6097113 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content35% 
IMG OID637720200 
Productglycosyl transferase, group 1 
Protein accessionYP_325335 
Protein GI75911039 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000641905 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0482294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAA TTTATTATCA AAAGTCTCCT CTAAAAGTTT TAATGCTCGG TGCTAGTTTA 
GATGTCCAAG GTGGAATTAC GTCAGTTGAA AAACTAATTA TCGAAAATGT GCGCCCAGAA
TTACAAATTA CTCATGTTGC TACATTTGCA CCTGGATCTG GACGGCATAA TATTTTCGTA
TTTCTACAAT CAATTAAAAT ACTGATACAA AATCTGATAC AAAGAAAAAC AGACTTAGTC
CATATTCATT TCGCTGAGAG AGGCAGTACT TTCCGAAAAC TAATTCTTGT CCTTATAATT
CTTAGCTTTC GCCAGCCTTT TATTCTTCAT GCTCATGGCG CAACATATCA AGAATTTTTT
GCCGATCTTC CTAAGATACT GCAAAAAATT ATATCTAATT TATTTAGGCG ATGTAGTCAA
TTTATAGCTC TATCAGAAAG TTGGAAGTCT TATTATTTAG AAACATTTAA TCTTGATAAA
AATCAAATTT CCGTACTACA TAATCCTGTA AAAATGCCAA CCTTTATTCC TGTAAGACGA
CAAAAACAAT CTGTAAAATT TGTCTTTCTT GGAAGAATTG GTAAACGCGG TGGTGCGCTA
GACGTAGCAA AATCTGTTAT GAAGTTCCCT CAGCAAGATA AAGGCGCATT TGATCTTATT
AAAGCATTTG CAGCCCTACC CGAAGAAAGT AAAAAATCTG CTGAATTGGT TCTAGCTGGT
AATGGAGATT TAGATAAAGC TCAACAACTA ATTCAAGAAT TAGGTCTTGA AGCTCAAGTA
AAAATTAGCG CCTGGCTGAA TCCTGAACAA AGAGATGCTC TGATAGCATC AGCAGATGTT
TTTGTTTTAC CTTCATATAA CGAAGGTTTG CCTATGTCAA TGTTAGAAGC CATGTCATGG
GGTTTACCTG TGATTGTGAC ACCTGTTGGT GGCATACCTG AAGTGATCAA TCACAATCAA
AACGGCATAT TAGTGCAACC AGGAAATCAA CAACAGTTAG TACAAGCCAT GCAGCAACTT
ATTAATGACG AAGATATGAG GATTGCGTTA GGTAATGCTG CCCGCCATAG TGTTGAATAT
TTTGACGTTA AACACTACAT AAATTCTTTA TCAGAAACTT ATTTCTCAGC AGTTCAATGT
AGTAATTATT TAGTTAATTC AACAACAGAA ATGGAATCAA AATATTAA
 
Protein sequence
MNRIYYQKSP LKVLMLGASL DVQGGITSVE KLIIENVRPE LQITHVATFA PGSGRHNIFV 
FLQSIKILIQ NLIQRKTDLV HIHFAERGST FRKLILVLII LSFRQPFILH AHGATYQEFF
ADLPKILQKI ISNLFRRCSQ FIALSESWKS YYLETFNLDK NQISVLHNPV KMPTFIPVRR
QKQSVKFVFL GRIGKRGGAL DVAKSVMKFP QQDKGAFDLI KAFAALPEES KKSAELVLAG
NGDLDKAQQL IQELGLEAQV KISAWLNPEQ RDALIASADV FVLPSYNEGL PMSMLEAMSW
GLPVIVTPVG GIPEVINHNQ NGILVQPGNQ QQLVQAMQQL INDEDMRIAL GNAARHSVEY
FDVKHYINSL SETYFSAVQC SNYLVNSTTE MESKY