Gene Ava_4806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4806 
Symbol 
ID3679421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6036651 
End bp6037493 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content45% 
IMG OID637720163 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_325298 
Protein GI75911002 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA CACTATACCA ACAAATTCAG CAATTTTACG ACGCTTCCTC TGGGCTGTGG 
GAAGAGATTT GGGGCGAACA CATGCACCAC GGTTATTATG GTGTAGACGG TACTGAACAA
AAAAACCGTC GTCAGGCGCA AATTGATTTA ATTGAAGAAT TACTTACTTG GGCAGGGGTA
CAAACAGCAG AAAATATACT AGATGTGGGT TGTGGTATTG GTGGTAGTTC TCTATATTTG
GCAGAAAAGT TGAATGCTAA AGCTACAGGA ATTACCCTGA GTCCGGTGCA AGCTGCTAGA
GCCACAGAAA GAGCCAAGGA AGCTGGTTTA AGTGGTAGAA GTCAGTTTTT AGTGGCAAAT
GCCCAAGCAA TGCCTTTTGA TGATAATTCT TTTGACTTGG TGTGGTCGCT GGAAAGTGGC
GAACATATGC CAGATAAAAC CAAGTTTTTG CAAGAGTGTT ACCGAGTCCT AAAACCGGGT
GGTAAGTTAA TCATGGTGAC ATGGTGTCAT CGTCCTACGG ATGAAACACC ACTGACGGCT
GATGAACAAA AACACCTAGA AGATATTTAT CGGGTGTATT GTTTGCCTTA TGTAATTTCG
TTGCCAGAGT ATGAGGCGAT CGCACGTCAA CTACCATTAA ACAATATCCG CACCGCCGAC
TGGTCGCAAT CCGTCGCCCA ATTTTGGAAC ATAGTCATCG ATTCCGCCTT TACTCCCCAA
GCAATATTTG GGTTACTCCG CGCTGGTTGG ACTACCATCC AAGGAGCATT ATCACTAGGC
TTAATGCGTC GCGGTTATGA GCGGGGGTTA ATTCGGTTTG GGTTGCTGTG TGGGGATAAG
TGA
 
Protein sequence
MSATLYQQIQ QFYDASSGLW EEIWGEHMHH GYYGVDGTEQ KNRRQAQIDL IEELLTWAGV 
QTAENILDVG CGIGGSSLYL AEKLNAKATG ITLSPVQAAR ATERAKEAGL SGRSQFLVAN
AQAMPFDDNS FDLVWSLESG EHMPDKTKFL QECYRVLKPG GKLIMVTWCH RPTDETPLTA
DEQKHLEDIY RVYCLPYVIS LPEYEAIARQ LPLNNIRTAD WSQSVAQFWN IVIDSAFTPQ
AIFGLLRAGW TTIQGALSLG LMRRGYERGL IRFGLLCGDK