Gene Ava_4794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4794 
Symbol 
ID3679448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6024730 
End bp6025662 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content50% 
IMG OID637720151 
Productphytoene synthase 
Protein accessionYP_325286 
Protein GI75910990 
COG category[I] Lipid transport and metabolism 
COG ID[COG1562] Phytoene/squalene synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000235829 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAC TGCCTGATTC CCCCCCGCGC ATGAAAACGC TGGTCTCTGT AGACGAGTCA 
TATAAACTTT GTCGGCATCT CACAGCCAAG TATGCCAAAA CCTTTTACTT GGGTACATTG
CTGATGAGTC CGGCAAAGCG CCAAGCTATC TGGGCAATTT ACGCCTGGTG TCGCCGTACA
GATGAATTAG TGGACGGGCC CGCATCCGCC ATTACTACGC CAGAAACCCT AGACCTATGG
GAGCAGCATC TGGAAGCGAT GTTTGCGGGA CACCCCAAAG AAAATTACGA CGTAGCCTTG
GTGGACGCAA TCCAACGCTT TAATCTAGAC ATTCAACCCT TTCGGGACAT GATTGCTGGA
CAGCGCATGG ACTTACATCG TAGCCGCTAC CAAACCTTTG AGGAGTTATA CCTCTACTGT
TACCGCGTCG CTGGGACTGT AGGGTTAATG TCAACAGCCG TGATGGAGGT AGACAACACC
ACCAACACAG CACCTTGGCA TCAAAGCAAG CCACTATATA TTCCCACACA AGAAGCGATC
GCCTTAGGTA TTGCCAATCA ACTTACCAAC ATTCTGCGGG ATGTTGGTGA AGATGCCCGA
CGAGGACGAA TTTACATTCC TCTGGAAGAT TTAGCACGAT TTAACTACAC CGAGCAAGAC
TTCTGCAACG GCGTTGTAGA TGAGCGCTGG CGCTCCCTCA TGCGCTTTCA AATAGATAGA
GCGCGGCAAT TCTACACCGA AGCAGAAAAG GGCATTACTC ACCTGGCCCC CGATGCTCGT
TGGCCAGTGT GGGCGGCTTC TATGTTATAC GGTCAAATTT TAGATGTGAT TGAACGCAAC
GATTACGATG TCTTCAGTCA ACGCGCTTAC GTCCCCCAAT GGAAAAAGTT ACGCACCTTA
CCCATAGCTT GGATGCGATC GCAAGTTCTC TAA
 
Protein sequence
MLQLPDSPPR MKTLVSVDES YKLCRHLTAK YAKTFYLGTL LMSPAKRQAI WAIYAWCRRT 
DELVDGPASA ITTPETLDLW EQHLEAMFAG HPKENYDVAL VDAIQRFNLD IQPFRDMIAG
QRMDLHRSRY QTFEELYLYC YRVAGTVGLM STAVMEVDNT TNTAPWHQSK PLYIPTQEAI
ALGIANQLTN ILRDVGEDAR RGRIYIPLED LARFNYTEQD FCNGVVDERW RSLMRFQIDR
ARQFYTEAEK GITHLAPDAR WPVWAASMLY GQILDVIERN DYDVFSQRAY VPQWKKLRTL
PIAWMRSQVL