Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4794 |
Symbol | |
ID | 3679448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6024730 |
End bp | 6025662 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637720151 |
Product | phytoene synthase |
Protein accession | YP_325286 |
Protein GI | 75910990 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000235829 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAAC TGCCTGATTC CCCCCCGCGC ATGAAAACGC TGGTCTCTGT AGACGAGTCA TATAAACTTT GTCGGCATCT CACAGCCAAG TATGCCAAAA CCTTTTACTT GGGTACATTG CTGATGAGTC CGGCAAAGCG CCAAGCTATC TGGGCAATTT ACGCCTGGTG TCGCCGTACA GATGAATTAG TGGACGGGCC CGCATCCGCC ATTACTACGC CAGAAACCCT AGACCTATGG GAGCAGCATC TGGAAGCGAT GTTTGCGGGA CACCCCAAAG AAAATTACGA CGTAGCCTTG GTGGACGCAA TCCAACGCTT TAATCTAGAC ATTCAACCCT TTCGGGACAT GATTGCTGGA CAGCGCATGG ACTTACATCG TAGCCGCTAC CAAACCTTTG AGGAGTTATA CCTCTACTGT TACCGCGTCG CTGGGACTGT AGGGTTAATG TCAACAGCCG TGATGGAGGT AGACAACACC ACCAACACAG CACCTTGGCA TCAAAGCAAG CCACTATATA TTCCCACACA AGAAGCGATC GCCTTAGGTA TTGCCAATCA ACTTACCAAC ATTCTGCGGG ATGTTGGTGA AGATGCCCGA CGAGGACGAA TTTACATTCC TCTGGAAGAT TTAGCACGAT TTAACTACAC CGAGCAAGAC TTCTGCAACG GCGTTGTAGA TGAGCGCTGG CGCTCCCTCA TGCGCTTTCA AATAGATAGA GCGCGGCAAT TCTACACCGA AGCAGAAAAG GGCATTACTC ACCTGGCCCC CGATGCTCGT TGGCCAGTGT GGGCGGCTTC TATGTTATAC GGTCAAATTT TAGATGTGAT TGAACGCAAC GATTACGATG TCTTCAGTCA ACGCGCTTAC GTCCCCCAAT GGAAAAAGTT ACGCACCTTA CCCATAGCTT GGATGCGATC GCAAGTTCTC TAA
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Protein sequence | MLQLPDSPPR MKTLVSVDES YKLCRHLTAK YAKTFYLGTL LMSPAKRQAI WAIYAWCRRT DELVDGPASA ITTPETLDLW EQHLEAMFAG HPKENYDVAL VDAIQRFNLD IQPFRDMIAG QRMDLHRSRY QTFEELYLYC YRVAGTVGLM STAVMEVDNT TNTAPWHQSK PLYIPTQEAI ALGIANQLTN ILRDVGEDAR RGRIYIPLED LARFNYTEQD FCNGVVDERW RSLMRFQIDR ARQFYTEAEK GITHLAPDAR WPVWAASMLY GQILDVIERN DYDVFSQRAY VPQWKKLRTL PIAWMRSQVL
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