| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4725 |
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| Symbol | |
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| ID | 3679705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5910148 |
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| End bp | 5913261 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637720081 |
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| Product | polymorphic membrane protein |
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| Protein accession | YP_325217 |
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| Protein GI | 75910921 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.708929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATTA CTATTTTAAC AGTCAATACT ACAACCGATC AAAATGATGG CAGTGCTGCT
AATGGTTTAT CTCTGCGAGA TGCGATTTTA ATTGCTAATG CTAATCCGAA TACTGAGTAT
GAAATTCGGT TAACTGGCGG TGTAACTTAC AATCTTACGT CGAACGGGAT TAATGAAGAT
AATGCCCTCA CAGGTGATTT AGATATTAAG AGCCGTAATA ATGTACTTTA TATTGTCTCA
GTTGGTGGTG AGAAAGCGAC TATTGATGCG TCTGGTTTAT TAAATAGCGA TCGCGTTTTT
CATGTCCTCA ATGGTGGTGC TTTAAGTTTA CAGAATGTAG TGGTTACGGG GGGCAAGATA
TCTAATGATG GTGGAGGTAT TAGAGTTGAT TCTAATGGCT ACCTAGATTT GTACAACACT
AACGTCAGTG GCAATAGTGC AGAGGGTGGG AACTGGGGTG GTGGTATTTA TAACAACAAT
GGTACAGTCT ACTTACGAAA TGGTTCTACT ATCAGTAACA ATCAAGCCCT CAACGGTGGC
GGTATCCTTA ACTCTGGCAC TCTGATTACG ATTGACTCCA CCATAAGTAA TAACAACTCA
GGTAGTGGAG GTGGAATCTA CAACTTTGAT ACATTGACGG TAATCAACAC TACAGTTAGT
AATAATAGTG CAAGAGGCAG TGGTGGCGGT ATTCAAGGTA ACGGTAGTTT TTCCTCTATT
GCTTTAGTTA ACACAACAAT TAGTGGAAAC ACAGCAGGAA GCGGTGGGGG TGGTATAGAT
TCTACTGGGG GCAGCGTCAC AAATATACTT AACAGCACGA TTACCAATAA TACAGCAGGC
ATTTTAGGAG GAGGTGGAAT TAGAGGCAGT GCCAATTTAA AGAACACAAT TGTTGCCGGA
AATTTTGGTA ATTATGATTA CCAAGGGACA GGCAAAGATA TTCAAGGAAC AGTTAACGGT
AATAATTATA ACCTGATTGG CTCTCTAGCT GGAGCCAGTG GTACTGTAGG CACAGGTACA
GATATTGTCA ACCCCAACCC CGGACTTGGC CCCTTACAAA ATAACGGTGG ACTCTCTCTC
ACCCACACCC TGCTTGCTGG TAGTCCTGCT ATAAATGCCG GTAACAATAA TTTAATTCCG
GCTGATGCAG AAGATATAGA CCGTGATGGC GACACGACAG AACCCACTCC CTTTGACCAA
AGAGGCTTGG CACGAGTTAG CGGTGGTACA GTAGATATTG GGGCATTTGA GGTACAATCT
GCTACCCTGC CAACCATCAC CATCAACAAT GTTACCGTTA CTGAAGGCAA CACAGGGACA
ACCAATGCCA CTTTTACCGT CACTCTCTCC GCCGCCAGTA CTTCTGCTGT TACGGTTAAC
TATGCTACAG CTAACGGCAC AGCGACAGCA GGTAATGATT ACACCTCAAA CACAGGTATC
TTAACTTTCA ACCCAGGGGA AACCAACAAA ACTATCACTG TTGCGGTGAG AGGCGATACT
ATAGCCGAAC CGAATCAGAC ATTTTTCCTG AACCTCAGCA ATTCCCTTGG CGCTACCATT
GCTGATAACC AAGGATTGGG AACTATCACC GATGATGATG CTAATCCTAC AATTGCTATT
GCTGATGTGA GCCGGAATGA AGGTAATAGC GGTACAAGTA ACACCACATT TACTGTCACT
CTATCGGCTG CCAGTGAAAA GACAATTACA GTTAATTATG GGACAGCTAA TGGTACAGCG
ACAGCCGGAA GTGACTACAC ATCTACAACA GGTACATTAA CTTTCAATCC AGGGGATACG
AGTAAAACCT TCACTGTTGC TGTAACTGGT GATACAACAG TTGAAGCCAA CGAAACCTTC
TTCGTTAATC TCAGCAACGC CACTAACGCC ACCATCACTG ATAATCAGGC GTTAGCAACT
ATACTCAATG ATGACACAGC CACTCTTCCC ACTCTTTCAA TCAACGATAT CACCATTGTT
GAAGGGCAAA GCAGTCAAGC AGTCTTAACT GTTACCCTCA GCAGTGCTTC TAGTCAACCA
GTCAGCGTTA ACTACTCTAC AGTAGCTGGT ACTGCTACAG CTAATACAGA CTATACCAGC
CGCAGTGGTA CTGTAACTTT TGCTGCCAAT ACTACCACGG CGACAATTAC AATTCCGATC
CTGAACGATA ATCTCAATGA AGCTAACGAA ACCTTGAGAG TTAATCTTTC TAGCCCTACC
AATGCAACTA TACAAAAAGC TTCTGGCACT GTCACTATTA CTGACACTTT GCAAGCTAGT
GTAACCACAA CCTTAGCGGA GGGGATTGAG AATTTAACTT TACTTGGCAG TAGCAATATT
AACGCTACTG GTAACAGTAG TAATAATACA TTGACGGGGA ATAGTGGGAA TAATATTCTG
ACTGGTGGTA ATGGGGATGA TACCTACAAT TTCAATGCTT CCACACCATT AGGTAGCGAT
CGCATTCAAG AAATTACCAC AGGCGGCAAT GATACGATCA GTTTTGCTGG TACAAATAAC
GCCGCACGCG TAAATTTAGG TACTATTGCC ACCCAGACCA TCAACAGTAA CTTAAAGTTG
ACCCTATCTG CTAATAATGT GATTGAAAAT GTCGTTGGTG GTAATGGCAG CGATCGCCTC
ATTGGCAATA GCCTCAATAA TACTCTGACT GGTGGCAATG GTAATGATGT GTTAACAGGT
AGAGGCGGGG CAGATACTTT GATTGGCGGG TCTGGCAATG ATATCTTGAC AGGTGGAACT
GAGAGCGATC GCTTTTTATA TAGTAGTGGA CGAGCTTTTA CTAGTAACGA TTTTGGTATA
GATATCCTGA CTGACTTTAC TTCTGGAAGC GATAAGCTGG TTTTGAGTAA AAGGACATTT
ACGGCTTTAA GTAGTGTTAT TGGTGATGGA TTGAGTCAAG TATCTGATTT TACCACTGTC
GAGGATGATG ATTTAGCCGC AACCAGTACA GCATTCCTCG TTTACAGCAT CGGTAGTGGT
AGTCTTTACT ATAACCAAAA TGGCAGTGCT GCTGGGTTTG GTACTGGTGC GGAGTTGGTT
AATTTGATTA ATTTACCTAG TTTAACTGCG GCTGATTTGG CGATCGTTGC TTGA
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| Protein sequence | MAITILTVNT TTDQNDGSAA NGLSLRDAIL IANANPNTEY EIRLTGGVTY NLTSNGINED
NALTGDLDIK SRNNVLYIVS VGGEKATIDA SGLLNSDRVF HVLNGGALSL QNVVVTGGKI
SNDGGGIRVD SNGYLDLYNT NVSGNSAEGG NWGGGIYNNN GTVYLRNGST ISNNQALNGG
GILNSGTLIT IDSTISNNNS GSGGGIYNFD TLTVINTTVS NNSARGSGGG IQGNGSFSSI
ALVNTTISGN TAGSGGGGID STGGSVTNIL NSTITNNTAG ILGGGGIRGS ANLKNTIVAG
NFGNYDYQGT GKDIQGTVNG NNYNLIGSLA GASGTVGTGT DIVNPNPGLG PLQNNGGLSL
THTLLAGSPA INAGNNNLIP ADAEDIDRDG DTTEPTPFDQ RGLARVSGGT VDIGAFEVQS
ATLPTITINN VTVTEGNTGT TNATFTVTLS AASTSAVTVN YATANGTATA GNDYTSNTGI
LTFNPGETNK TITVAVRGDT IAEPNQTFFL NLSNSLGATI ADNQGLGTIT DDDANPTIAI
ADVSRNEGNS GTSNTTFTVT LSAASEKTIT VNYGTANGTA TAGSDYTSTT GTLTFNPGDT
SKTFTVAVTG DTTVEANETF FVNLSNATNA TITDNQALAT ILNDDTATLP TLSINDITIV
EGQSSQAVLT VTLSSASSQP VSVNYSTVAG TATANTDYTS RSGTVTFAAN TTTATITIPI
LNDNLNEANE TLRVNLSSPT NATIQKASGT VTITDTLQAS VTTTLAEGIE NLTLLGSSNI
NATGNSSNNT LTGNSGNNIL TGGNGDDTYN FNASTPLGSD RIQEITTGGN DTISFAGTNN
AARVNLGTIA TQTINSNLKL TLSANNVIEN VVGGNGSDRL IGNSLNNTLT GGNGNDVLTG
RGGADTLIGG SGNDILTGGT ESDRFLYSSG RAFTSNDFGI DILTDFTSGS DKLVLSKRTF
TALSSVIGDG LSQVSDFTTV EDDDLAATST AFLVYSIGSG SLYYNQNGSA AGFGTGAELV
NLINLPSLTA ADLAIVA
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