| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4672 |
|---|
| Symbol | |
|---|
| ID | 3679828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5835906 |
|---|
| End bp | 5837105 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637720028 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_325164 |
|---|
| Protein GI | 75910868 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03469] hopene-associated glycosyltransferase HpnB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCAT TCTTTCTAGG GTTAATATTG TTATCTTTAG TTATTTGGTT GGGATTATTG
GTTTTTTGGG GGCAGTTTTG GCGGTTAGAC CAGAGATTAG AAGGTGAGGA GATTCCGTTA
GTATCTTTAC CGAAAATTTG TGCGGTTATC CCTGCACGTA ACGAAGCTGA GTTAATACCG
ATGAGCTTGC GATCGCTCCT TCTTCAAGAT TATCCTGGAG ACTTCCACAT CTTTTTAGTT
GATGACCAAA GTACAGATGG TACAGCCGCT TTTGCTGAAG GGGTAGCCCA TGCTGTAGAC
AAGGCCCAAC AATTACACAT TGTTTCTGGC GAATCCTTAC CCCCTGGTTG GTCTGGTAAA
CTCTGGGCAG TTGAACAAGG CATTCAAAAA GCCAAGACAT TTGCACCAGA TTATTTTTTC
CTCACGGATG CAGACATTGA ACATGATGTC AGCAACCTGC GGCGATTAGT CGCCAAAGCC
CTACAGGAAG ATTTAGACCT AGCATCTGTA ATGGTAAAAC TCAGGTGTGA AAGCTTTTGG
GAAAAATTTT TAATTCCCGC CTTTGTCTTT TTCTTTCAAC AACTCTACCC CTTTCGCTGG
GTAAATAACC CCAAAAACAA AATGGCTGCG GCGGCTGGTG GGTCTATTTT AATTCGTCGA
GAAGCCCTAG AACAAATTGG TGGTATTCAA GTCATTCGCC AAGCCTTAAT TGATGATTGC
ACCCTCGCAC AAATCGTCAA ATCTGGGGGA CAAGGAAGAA AAGGAGACAA ATTAAACAAT
GCTACTTCCA GAAAAATCTG GCTAGGACTG AGTTCATCAA CTCGCAGTCT ACGACCATAT
GAATCTTTGC AAACAATTTG GGATATGGTG GCGCGGACTG CATACACTCA GTTAAATTAT
TCCCCCTGGT TACTGTTGGG AACTGTTGTA GGGATGACGT TAATTTATTT GCTCCCACCT
GTAGCTACTA TTATCGGTGT ATTGATAGCA GATTGGGCGA TCGCATTTTC AGGTTTAGTT
GTATGGTTGT TGATGTCCTT GGCTTATTTC CCCACGATTC GTTTTTATAA ACTTTCTCCG
TTATTAGCTT TTAGTTTACC AGCGATCGCC TTTCTCTATA CCCTCATGAC CATTGACTCT
GCATTCCGTC ATTGGCAAGG GCGCGGTGGT GCGTGGAAAG GTAGAGTATA CCCAGGCTAG
|
|---|
| Protein sequence | MGAFFLGLIL LSLVIWLGLL VFWGQFWRLD QRLEGEEIPL VSLPKICAVI PARNEAELIP
MSLRSLLLQD YPGDFHIFLV DDQSTDGTAA FAEGVAHAVD KAQQLHIVSG ESLPPGWSGK
LWAVEQGIQK AKTFAPDYFF LTDADIEHDV SNLRRLVAKA LQEDLDLASV MVKLRCESFW
EKFLIPAFVF FFQQLYPFRW VNNPKNKMAA AAGGSILIRR EALEQIGGIQ VIRQALIDDC
TLAQIVKSGG QGRKGDKLNN ATSRKIWLGL SSSTRSLRPY ESLQTIWDMV ARTAYTQLNY
SPWLLLGTVV GMTLIYLLPP VATIIGVLIA DWAIAFSGLV VWLLMSLAYF PTIRFYKLSP
LLAFSLPAIA FLYTLMTIDS AFRHWQGRGG AWKGRVYPG
|
|---|
| |