Gene Ava_4589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4589 
Symbol 
ID3679978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5745981 
End bp5747369 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content45% 
IMG OID637719944 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_325081 
Protein GI75910785 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.272386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTTT GTGTAATTGG TACTGGTTAT GTTGGCTTGG TAACAGGAGC TTGCTTGGCT 
CACATCGGAC ACGATGTGAT TTGCATAGAT AACAACGAAG AAAAAGTCAA GATCATGAAG
GCCGGGCAAT CACCAATTTT TGAGCCTGGA CTTTCAGAAA TTATGCAGTC GGCTATCCAA
TCCGGCAAGA TTCAATTTTC TACCGATTTG GCAGCAGGTG TAGCCCACGG AGAAATTTTA
TTTATTGCGG TTGGTACACC ACCACTACCC ACCGGTGAAA GCGATACCCG TTATGTAGAA
GCTGTAGCCC GTGGTATCGG TGCTAATCTC AACGGTGGTT ATAAAGTAAT TGTGAATAAA
TCTACAGTAC CCATCGGCTC AGGTGACTGG GTAAGAATGA TTGTTTTGGA TGGGATTGCA
GAACGGCAAA AAACCCTCGT AACCGCAGGT GGCGGTAGTG TTGAGGATAA ATTACCAGAA
TTACCCCAGT TTGATGTAGT TAGTAACCCT GAGTTCTTGC GTGAAGGTTC AGCTGTATAC
GACACATTTA ACCCTGACCG CATTGTTTTG GGAGGTAATA GCCCTAGAGC GATCGCTTTA
ATGCAGGAAT TATACGCCCC CATTGTCGAG CGCAAATTTG CAGAAAACCA ATCTTTACCA
CCAGTACCCA TTCTGGCTAC AGACCTCAGT TCCGCAGAAA TGATTAAATA TGCGGCAAAC
GCTTTCTTAG CCACTAAGAT TAGTTTTATT AACGAAGTAG CTAACATTTG CGATCGTGTT
GGTGCAGACG TTACCCAAGT CGCCAAAGGT ATTGGTTTAG ACTCCCGTAT CGGTAACAAA
TTCTTACAAG CTGGGATTGG TTGGGGTGGT TCCTGCTTCC CCAAAGACGT AGCTGCGCTG
ATTCACACCG CCGACGACTA CGGCTATGAA GCACAGCTAT TAAAATCTGC TGTTAGCGTC
AACGAACGTC AACGCTTAAT TGCTTTAGAA AAACTGCAAC AAGTCCTGAA AATCCTCAAA
GGTAAAACTG TTGGTTTACT CGGTCTTACA TTTAAGCCCG ACACCGACGA CTTACGTGAT
GCACCAGCAT TGAACTTAAT CGAGCAACTA AACCGTTTAG GTGCTAAAGT CAAAGCCTAC
GACCCCATCG TTTCCCAAAC TGGTATGCGC CACGGTCTTT CTGGCGTATT AGTAGAAACC
GATGCAGAAC GTTTAGCTGA TGGTTGTGAT GCGTTGGTAC TTGTAACCGA ATGGCAGCAA
TTTAGCGGTC TTGACTACGC CAAAATGGCC AAATTAATGA ATAACCCCGT CGTGATTGAC
GGTCGTAATT TCCTCGATCC TGAAACTCTA GTACGGGCTG GATTCCAGTA TGTAGGTGTT
GGAAGATAG
 
Protein sequence
MRVCVIGTGY VGLVTGACLA HIGHDVICID NNEEKVKIMK AGQSPIFEPG LSEIMQSAIQ 
SGKIQFSTDL AAGVAHGEIL FIAVGTPPLP TGESDTRYVE AVARGIGANL NGGYKVIVNK
STVPIGSGDW VRMIVLDGIA ERQKTLVTAG GGSVEDKLPE LPQFDVVSNP EFLREGSAVY
DTFNPDRIVL GGNSPRAIAL MQELYAPIVE RKFAENQSLP PVPILATDLS SAEMIKYAAN
AFLATKISFI NEVANICDRV GADVTQVAKG IGLDSRIGNK FLQAGIGWGG SCFPKDVAAL
IHTADDYGYE AQLLKSAVSV NERQRLIALE KLQQVLKILK GKTVGLLGLT FKPDTDDLRD
APALNLIEQL NRLGAKVKAY DPIVSQTGMR HGLSGVLVET DAERLADGCD ALVLVTEWQQ
FSGLDYAKMA KLMNNPVVID GRNFLDPETL VRAGFQYVGV GR