Gene Ava_4544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4544 
Symbol 
ID3680109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5697402 
End bp5699585 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content47% 
IMG OID637719900 
Productassimilatory nitrate reductase (ferredoxin) precursor 
Protein accessionYP_325037 
Protein GI75910741 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAAT CTACCAAAAC CCTATGTCCT TATTGTGGTG TCGGCTGTGG ACTAGAAGTA 
ACACCACCAG CCCAACTCAA CAAAGCCACA AATCGAGATA GCCAAGGAAA TCCAATTTGG
CGGGTGCGGG GTGATAAAGC CCATCCATCT AGCCAGGGGA TGGTTTGTGT CAAAGGGGCG
ACGATCGCTG AGTCTTTGGA TAAAAATAGA TTACATTACC CAATGGTGCG GGACTCACTA
GATCAAGAGT TCCGCCGTGT GAGTTGGGAT GAAGCTTTTG ACCTCATCAC CAAGCGTATT
CAAACTGTGC GCCTTACTCA AGGGGCGGAA GCTATATGTA TGTATGGTTC CGGTCAATTT
CAAACTGAGG ATTATTACAT AGCCCAAAAA CTGATGAAAG GTTGTTTGGG TAGCAATAAT
TTTGATGCTA ACTCCCGCTT ATGTATGTCC AGTGCTGTCT CTGGGTATAT TCAAAGTTTT
GGGGCTGATG GGCCTCCCTG TTGCTATGAA GATTTGGAGT TAACTGACTG TGCATTTTTA
ATTGGGACAA ACACCGCCGA ATGTCACCCC ATTGTTTTTA ACAGACTGGA GAAGTACCAC
AGAAAAAACC ATCAGGTAAA GATGGTTGTG GTTGATCCTC GACGCACACC TACCGCCGAA
GCAGCTGATT TACATTTGGC GATTAAACCG GGTACAGATA TCGACTTGTT AAATGGTATC
GCCCATTTAT TGATGCGTTG GAACATGATT GATGTCGGTT TCATCGATGA CTGTACCAGC
AACTTTTCGG CTTACGCTGA GGTAATTCGC CACTATTCGC CGGAGGTAGT AGCTCGTCAA
TGTGGTATCA CCGTTGAGGA TTTAGAAATA GCCGCCCGTT ATTGGGGTGA ATCGCAGCGT
GTGTTGTCTT TGTGGTCGAT GGGTGTGAAT CAATCGAGTG AAGGTACAGC CAAAGTTAGA
ACGATTATCA ACCTACATTT AATGACCGGA CAAGTCGGAA AACCAGGGAT GGGGCCTTTT
TCTCTCACTG GTCAACCGAA TGCAATGGGA GGACGGGAAG CAGGTGGTTT AGCTCATTTA
TTACCGGGTT ATCGATTGGT GAAAAATCCC CAACACCGGG CGGAAGTGGA AGGATTTTGG
GGATTCCCAT CAGGACAAAT TTCACCCCAT CCCGGTTTAA CTGCGTGGGA TATGATCACT
GGCTTGGAAG ACGGTAATGT GGGTTTACTG TGGATTGCAG CTACTAACCC AGCTGTAAGT
ATGCCAGATT TGGAACGGAC GAAAAAGGCA TTATTGCGAT CGCCTTTCAC AATCTACCAA
GATGCTTACC ACCCTACAGA AACTACAGCT TACGCTCATG TTCTGTTACC AGCAGCCCAA
TGGGGTGAAA AAACTGGGGT CATGACCAAC TCAGAACGCC GAGTCACACT ATGTCAAGCC
TTCCGCCAAC CACCACGAGA AGCCAAGCCA GATTGGGAAA TTTTCGCGGA AGTGGGACGG
CGATTAGGTT TTGAGGACAA GTTCGCTTTT GGAAACTCAG ATCAAGTCTA CGCCGAGTTT
GCCCAACTGA CCAAGGGTCG CCCTTGTGAT ATGTCTGGTA TTAGCCATCA AAAATTACAA
GCCCAAGGCC CCACCCAATG GCCATATCCA GAAATGGGGA ATGGGGATAA GAATAAAAGA
CTCTACACTG ACTTACGCTT TCATACCCCT GATGGTCGCG CACGTTTTGG GGCTTATTAT
TCTCAAGGAC TAGCAGAACC ACCAGACCCG GCTTATCCTT TTGTGTTGAC TACTGGACGA
TTATACGGAC ATTGGCACAC CCAAACCCGT ACAGGTCGGA TAGAAAAAAT CCGCGCCATG
CACCCCGAAC CATTTATCGA AATTCATCCT CGTGATGCGG CGAAGTTAGG CATTATAGAT
CATCAGGTGG TAGAAGTGCG ATCGCGTCGA GGTAGTGCTA AGTTTCCCGC CAAGGTGACA
AAAGCTATTT CCCCAGGTAC AGTTTTCGTC CCTATGCACT GGGGTACACT CTGGGCAGAG
GATGCGGAAG CTAATGCACT CACCCATTCA GAATCTTGCC CCGATTCATT ACAACCAGAG
TTAAAAGCCT GTGCAGTCCA ATTAATCCCA ATTTCTGTAG AAATTACAGC CGAAAATTAT
CAACTCCAGT CATCTCAGTG GTAA
 
Protein sequence
MTESTKTLCP YCGVGCGLEV TPPAQLNKAT NRDSQGNPIW RVRGDKAHPS SQGMVCVKGA 
TIAESLDKNR LHYPMVRDSL DQEFRRVSWD EAFDLITKRI QTVRLTQGAE AICMYGSGQF
QTEDYYIAQK LMKGCLGSNN FDANSRLCMS SAVSGYIQSF GADGPPCCYE DLELTDCAFL
IGTNTAECHP IVFNRLEKYH RKNHQVKMVV VDPRRTPTAE AADLHLAIKP GTDIDLLNGI
AHLLMRWNMI DVGFIDDCTS NFSAYAEVIR HYSPEVVARQ CGITVEDLEI AARYWGESQR
VLSLWSMGVN QSSEGTAKVR TIINLHLMTG QVGKPGMGPF SLTGQPNAMG GREAGGLAHL
LPGYRLVKNP QHRAEVEGFW GFPSGQISPH PGLTAWDMIT GLEDGNVGLL WIAATNPAVS
MPDLERTKKA LLRSPFTIYQ DAYHPTETTA YAHVLLPAAQ WGEKTGVMTN SERRVTLCQA
FRQPPREAKP DWEIFAEVGR RLGFEDKFAF GNSDQVYAEF AQLTKGRPCD MSGISHQKLQ
AQGPTQWPYP EMGNGDKNKR LYTDLRFHTP DGRARFGAYY SQGLAEPPDP AYPFVLTTGR
LYGHWHTQTR TGRIEKIRAM HPEPFIEIHP RDAAKLGIID HQVVEVRSRR GSAKFPAKVT
KAISPGTVFV PMHWGTLWAE DAEANALTHS ESCPDSLQPE LKACAVQLIP ISVEITAENY
QLQSSQW