| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4492 |
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| Symbol | |
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| ID | 3680193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5628517 |
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| End bp | 5630334 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719848 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_324985 |
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| Protein GI | 75910689 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTG ACTATTTTTT TAATCAGGGA TTATCCGATA ATTTATCGAG AGAATATCAA
AGAACGGTCA TTGGTGGCAC TAAGCCAACC AATCGCAAGG TTGATGCAGA AACTTACTGT
AAACGAGGGA TTACTTTTAG CCGTGAATTG AAAGATTATC AGGGGGCGAT CGCCTTTTTT
AATCTAGCTG TAGAAATTAA TCCTAATTAT GCCCAAGCCT ACTATCATCG GGGGAATGCG
CGTTACTGTC TTGCAGACTT TACAGCCGCG ATCGCCGATT ATGACCAAGC ATTACAAATA
AATCCTACAT TCGCAGAATA TTATTATTGT CGAGGTAACG CTTACTTGGC TCAAGGTGAC
TACGATCAAG CAATTGCCAA CTATATCAGC ACCATTGAGT TTGATCCTCT GTTAGCCAGT
AATATAAATG AAGATATTGC TAACGCCTAT TATTACCGGG GCTTACATAA TAGCGACCAC
GGGAATTATC AAGAAGCGAT TATAGATTTA CAACAAGCGT TGCAATGGCA TCCTTACTTT
GCCGCCGCTT ACAGCATTCG CGGGAACATT TACTATAAAT TGGGAGAGTA CCGACAAGCG
ATCGCCGACC ATGAGCGAGC AGTGCAATTA GACCCCAACC TAGCCGAAGC TTACCAAAAT
AGAGGTAACG CCTACTATGC CTTAGGAGCT TATCAAAAAG CGATCGCCGA TTACAACCGC
ACACTAGAAA TTAATCCTCA CCAAGTAGGA GCATATTATA ATCGCGGTCT GATTAGTTTT
TATCTCAACG AATATCAACA AGCCTTCGCA GATTTCAACC AAGTCTTAAG TTTCAACTCC
AAAGATGCAC AAGCATATTA CCAACGGGGA TTAATTTATG AAGCTTGGCA AGACTATCAA
AGTGCATTGG CAGACTACAA CCAAGCATTA CAGCTAAACC CTGAATTAGC TGTAGTCTAT
GGTGTTCGTG CCAATATCCA CCGCCATCTA GGAGACTACC CCAGCGCCTT AGCAGACGGC
AATCGCTTAC TGCAACTACA ACCTAATTTC GCCGCCGGAT ATTGCGATCG TGGCACATCT
CGCCGTTGCT TAGGCGATTA TCGAGGAGCA ATTACCGATT ACAATCAGGC ATTACAAATT
AATCCTAATA TTGCTGAAGC CTATTACGGT CGAGCCATCG CCCACGAAGC CCTACAAGAC
TTGATTGGGG CAATAGCAGA CTATACACAT TCCATCCGCA TATCCCCGGA TTTTGCCCCC
GCTTACTGCA ATCGCGGCAA TGCCCGTCGT CAGTTGGGAG ATACCAAGGG AGCCTTAGCA
GACTACAATC AAGCCCTAAC AATCAATACC CAACTCAGCG AAGCCTACTA CAACCGAGGC
TCCCTGCACT ACGACCAACA AAATTATCGC AGTGCGATCG CCGACTATAC CCAAGCCTTG
GAACTACAGC CCGAATCCGC CAGATATTAC AGCGATCGCG CCCATGCCCG TTACGCCTTA
CAAGATTATC AAGGAGCAGT TGCAGATTAT ACCCAATCAA TCGCCATCAA CCCTGGTTAT
GCGGAAGACT GGTACAATCG AGGTCGTAGT TATTTACTCT TGGGATACCT AGAAGAAGCA
CTAGCTGACT TAAACCAAGC CTTGAAGTTT CAACCCCACT GGGCTTCAGC TTACCTCCTC
CGAGCCGACA TCCTTCGTAA TCGCGGTGAC TATCAAGCAG CGATCACCGA CTTCCAAAAA
TCAGCTGACC TCTACTCTCA AGAAGGCAAC ACACAAAACT ATCAACAAAT TCTCGAAATT
ATAGCTGGAC TTAAGTAG
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| Protein sequence | MNADYFFNQG LSDNLSREYQ RTVIGGTKPT NRKVDAETYC KRGITFSREL KDYQGAIAFF
NLAVEINPNY AQAYYHRGNA RYCLADFTAA IADYDQALQI NPTFAEYYYC RGNAYLAQGD
YDQAIANYIS TIEFDPLLAS NINEDIANAY YYRGLHNSDH GNYQEAIIDL QQALQWHPYF
AAAYSIRGNI YYKLGEYRQA IADHERAVQL DPNLAEAYQN RGNAYYALGA YQKAIADYNR
TLEINPHQVG AYYNRGLISF YLNEYQQAFA DFNQVLSFNS KDAQAYYQRG LIYEAWQDYQ
SALADYNQAL QLNPELAVVY GVRANIHRHL GDYPSALADG NRLLQLQPNF AAGYCDRGTS
RRCLGDYRGA ITDYNQALQI NPNIAEAYYG RAIAHEALQD LIGAIADYTH SIRISPDFAP
AYCNRGNARR QLGDTKGALA DYNQALTINT QLSEAYYNRG SLHYDQQNYR SAIADYTQAL
ELQPESARYY SDRAHARYAL QDYQGAVADY TQSIAINPGY AEDWYNRGRS YLLLGYLEEA
LADLNQALKF QPHWASAYLL RADILRNRGD YQAAITDFQK SADLYSQEGN TQNYQQILEI
IAGLK
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