Gene Ava_4448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4448 
Symbol 
ID3680382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand- 
Start bp5571151 
End bp5571792 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content45% 
IMG OID637719802 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_324941 
Protein GI75910645 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.727457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAC CTGTAACGCA ACCTGCTTTG GTGATTCCCC AGCTAATTGT TGGCTTGGGG 
AATCCAGAGC CTAAATATGA CCAAACTCGC CATAATATTG GCTTTGCAGC TGTGGATGCT 
CTTGCTCGTG CTTGGAATAT TTCCTTGGCT GAAAATCGCA AATTTCAGGG TCAATACGGT 
GAAGGTACTG CCCCTGGAGG TGTAAAAATT CGCTTGCTTA AGCCACTAAC TTATATGAAT 
CGCTCAGGAC AAGCGATACA AGCAGTAACA AGCTGGTATA AATTGTCAGG TGAGTCTGTG 
TTGGTGATTT ATGATGATCT AGACCTGCCT TTGGGTAAGA CTCGTCTGCG CTTGTCTGGT 
TCGGCTGGGG GGCATAATGG TATGAAGAGT GCGATCGCTC ATCTTAGCAC GCAAAATTTT 
CCCCGCTTAC GTATTGGTAT AGGTAAGCCA AAAAATGCCG TGAATGGCGA TAACTCAGAA 
ACCGTTTCTC ATGTGTTAGG AAAATTTTCT GCCACCGAGA CTCAACTCAT GTCCCTTGTC 
TTGCAGTTCG TAGTTGAATG CGTAGAATTG AGTCTCAAAC AAGGCGTAGA AAAGGCGATG 
AATCGCTGCA ATAGTTATAC TGTCGAGGCT CCTAAATCTT AA
 
Protein sequence
MTEPVTQPAL VIPQLIVGLG NPEPKYDQTR HNIGFAAVDA LARAWNISLA ENRKFQGQYG 
EGTAPGGVKI RLLKPLTYMN RSGQAIQAVT SWYKLSGESV LVIYDDLDLP LGKTRLRLSG 
SAGGHNGMKS AIAHLSTQNF PRLRIGIGKP KNAVNGDNSE TVSHVLGKFS ATETQLMSLV 
LQFVVECVEL SLKQGVEKAM NRCNSYTVEA PKS