| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4426 |
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| Symbol | |
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| ID | 3680457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5543709 |
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| End bp | 5545496 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637719779 |
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| Product | surface antigen variable number |
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| Protein accession | YP_324919 |
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| Protein GI | 75910623 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTATC GCCACCCAAA GCTTGCAGTT TCTTGGTTGC CGTTGAGTAT ATTGTTATCA
CTCAACAGCA TAGATTTTCT GCCTGTGAAC GCTCAAGCTG TTGATCGGAC GCAACTACCA
AATAGTAACC CTACGCAGCC ACTACCTCAG CCTCAAGATA TCCAACCACC TGCACCTGTT
CCTTTACCTC CACCCCAGCA GCCACAGCAA TTACCGCCAC CAGGAGAGTT ACTCCAACCG
TCTTCTCCCG ACATTAACCC ACAGCAGCAA GTACCGGAAA ATGCGCCTCA AACTATTACA
GTAGAAAGGT TTGAAGTTGT TGGCAGTACA GTATTTAGTC AGGAAGAGTT GGCCAAGGTT
ACCACCGAGT TTACCAAAAG ACCTATTACA TTAGCAGAAC TGTTTCAAGC TCGTTCTAAA
ATTACCGAAC TATACGTCAA TAAAGGTTAC ATTACTTCTG GTGCTTATAT CCCACCGCAA
ACTATTAAAT CTGGTGTCAT TAAAATTCAG GTAGTGGAAG GTAGGTTAGA AGATATTCAA
ATTACTGGAA ATCGGCGACT CAAGCCTAAT TATGTCCGCA GTCGGTTGGC GATCGCCACA
CAACCCCCCC TCAACCGCGA AAGTTTACTA GAAGCACTAC AATTATTACA ACTTAATCCG
TTGATTCAAA ATCTTTCTGC TGAACTTTCA GCAGGTTCTC GTCCAGGGAC GAGTGTGCTA
CAGGTACAAA TCACAGAGGC AAAATCTTTT AATGCTCAAT TAGCTTTAGA TAATGGGCGA
TCGCCTGGAG TCGGGAGTTT TCGCCGCCGA GTACAATTAA ATGAAGCTAA CTTACTGGGG
TTCGGTGATA ACATCAGTTT AGTTTATAGT AATACTGATG GTAGTAACAC CCTTGATACA
AGTTACACTT TGCCATTGAA CCCCCGCAAC GGCACAATCA GCTTTAATTT TGGCACTTCG
TCCAGCAATG TGATTGAAGA ACCTTTTAAT ACTCTCGATA TCGAGTCCTC CTCTCGCTAC
TACGAAATCA CCTATCGTCA ACCATTAGCT CAATCTCCCA GCCAAGAATT CGCCATTGGT
TTGACAGCCT CACGTAGAGA AAGTGAAATA TCTTCTTCAC TGTTCGACGA AGAACCTCGT
TTACCTCCTA GTGTGCTTTC CCCTGGTGCT GATGATCAGG GACGCACCAG GATATCTGCG
TTGCGTTTCT TCCAAGAATG GACTACTCGT AACAGTCGGC AAGTTTTCGC AGTGCGATCG
CAATTTAATC TGGGTATAGG TGCATTGAAC GCCACAGTTA ATGCTGAACC TCCCGATAGT
CGCTTTTTTT CTTGGCAGGG ACAAGCACAA TGGGCGCGTC TCCTAGCTCC AGAAACCTTA
TTAATTATCA AAGCTAATAC ACAGATAGCA TCCAAAGGGC TGTTATCTTT GGAACAATTT
GGTCTGGGCG GTTTAGATAG CGTCCGGGGT TATCGGCAAG ATTTTCTCCT AACTGATAAT
GGTGCTTTTG CTTCAGCCGA AGTACAAATA CCAATTCTGC GATTATCTCG GTCTGATGCT
TTGTTACAAG TCACCCCGTT TGTGGATTTT GGTGTTGCTT GGAATAACTA TCGAGAGACT
CCAGACCCTA ATACCCTAGC ATCAGTTGGT CTTGGCTTGC GGTGGTCAAG TGGCGATCGC
TTTAGCGCCC GTCTTGATTG GGGAATTCCT TTAATATCCG TTGATTCACA AGCCAGAACC
TGGCAAGAGA ATGGATTATA TTTTTCCCTG ATTTATAATC CTTTTTAA
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| Protein sequence | MMYRHPKLAV SWLPLSILLS LNSIDFLPVN AQAVDRTQLP NSNPTQPLPQ PQDIQPPAPV
PLPPPQQPQQ LPPPGELLQP SSPDINPQQQ VPENAPQTIT VERFEVVGST VFSQEELAKV
TTEFTKRPIT LAELFQARSK ITELYVNKGY ITSGAYIPPQ TIKSGVIKIQ VVEGRLEDIQ
ITGNRRLKPN YVRSRLAIAT QPPLNRESLL EALQLLQLNP LIQNLSAELS AGSRPGTSVL
QVQITEAKSF NAQLALDNGR SPGVGSFRRR VQLNEANLLG FGDNISLVYS NTDGSNTLDT
SYTLPLNPRN GTISFNFGTS SSNVIEEPFN TLDIESSSRY YEITYRQPLA QSPSQEFAIG
LTASRRESEI SSSLFDEEPR LPPSVLSPGA DDQGRTRISA LRFFQEWTTR NSRQVFAVRS
QFNLGIGALN ATVNAEPPDS RFFSWQGQAQ WARLLAPETL LIIKANTQIA SKGLLSLEQF
GLGGLDSVRG YRQDFLLTDN GAFASAEVQI PILRLSRSDA LLQVTPFVDF GVAWNNYRET
PDPNTLASVG LGLRWSSGDR FSARLDWGIP LISVDSQART WQENGLYFSL IYNPF
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