Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4413 |
Symbol | |
ID | 3680443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5531795 |
End bp | 5532778 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637719766 |
Product | RNA methyltransferase TrmH, group 3 |
Protein accession | YP_324906 |
Protein GI | 75910610 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAACA AACCTAAAAA AATCAAGACT ACCAGCGAAG CAAATCGCGG ACAACCAGTA AAAATCAAGG GTAAGCGTGT CATAGCTAAT CCTATTCGTA GTCACAGAAA TGGAGAGAGC AATCCTACTA GCTCTAACAG CAGCTCACGG CCTCCGCGTC CACGCCGTCA ATTTTCTGAT GCAGCACCTA TTCCCAAAGT CAAAGAAGAG AACGAAAGCG ACATTATTTA TGGTCGTCAT CCAGTACTGA GTGCGCTGGA AAATCAACGT GGACTCAACC GCATCTGGGT AACTCCTCGA CTGCGTTACG ATCCCCGGTT TCATAATTTG ATTCTCCAAG CCAAAGAAAA TGGCGCGGTC ATAGACGAAG TAGAACCCAA ACGCTTAGAC CAAATCACCG ACCAAGCTAA TCACCAAGGC ATAGCTGCAC AGATCGCTCC CTACTCATAT ATTGAGTTTT ATGAACTAAT TGCCCAAGCT AAGTCTGTCA CCGATCCCGT CATTATCGTC GCTGATGGCA TCACCGACCC CCATAATCTA GGGGCAATTA TTCGTACAGC CGAAGCAATT GGCGCTCAAG GCTTGGTTAT TCCCCAAAGA AGAGCATCCG GGATCACCTC TACAGTTGTG AAAGTAGCAG CAGGGGCTTT AGAAAATTTT CCTGTAGCAA GGGTAGTTAA TCTCAGCAGG GCTTTAGAAG ATTTAAAAGA GGCTGGCTTC TGGATTTATG GAACTGCGGC TGGAGGTAGC GAACCTCTGC ACACAGTCAG TTTCCGCGGC CCCATTGTTT TGGTCATCGG CTCGGAAGGC GAAGGCTTGA GTATGTTAAC TCAGCGCTCA TGTGATGTTT TGGTATCAAT TCCCCTGATG GGTAAGACCC CTAGTCTGAA TGCCTCAGTT GCCGCAGGAA TGGCGCTTTA TGAGATTTTC CGCCAACGCT CATTAAACAC TTTGTACCTA GATAAATTGC CAAAGCCTCT ATGA
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Protein sequence | MTNKPKKIKT TSEANRGQPV KIKGKRVIAN PIRSHRNGES NPTSSNSSSR PPRPRRQFSD AAPIPKVKEE NESDIIYGRH PVLSALENQR GLNRIWVTPR LRYDPRFHNL ILQAKENGAV IDEVEPKRLD QITDQANHQG IAAQIAPYSY IEFYELIAQA KSVTDPVIIV ADGITDPHNL GAIIRTAEAI GAQGLVIPQR RASGITSTVV KVAAGALENF PVARVVNLSR ALEDLKEAGF WIYGTAAGGS EPLHTVSFRG PIVLVIGSEG EGLSMLTQRS CDVLVSIPLM GKTPSLNASV AAGMALYEIF RQRSLNTLYL DKLPKPL
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