Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4387 |
Symbol | |
ID | 3680573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5498245 |
End bp | 5498847 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637719740 |
Product | hypothetical protein |
Protein accession | YP_324880 |
Protein GI | 75910584 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00655602 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAAAAA CTGACTTATC CCTGACTCTT GCTGTCAATA TTCCACCTAC ACTAACGCTG ACAGTCTCCC ACGAACAATT TGTTCAATTA GCACTGGCTA ACAGAGATTT ACAATTAGAA CGAACTGCTA CGGGTGAGTT AATTGTTATG CCTCCAACTG GGAGTGATAC AGGGTATAAA AATTCAGATA TTAACGCCCA ACTGTGGTTA TGGAACCGTC AGGCTAAGTT AGGAGTGGTT TTTGACTCTT CAAGCGGTTT TCATCTTCCC AATGGTAGCG ATCGCTCTCC TGATGCGTCC TGGATACGTC AAGACCGATG GGATGCCCTC AGTATAGAAC AACAAGAGAC TTTTGCCCCC ATATGTCCTG ATTTTGTCCT GGAACTGCGT TCTAAAAATG ACTCTATAGA AAAGTTACGC GCCAAGTTGA GGGAATACAT CGACAATGGC GCTCGTTTAG GTTGGTTAAT TGACCGCAAA AATCGACAAG TAGAAGTTTA TCGCCCAGGT CAAGGTGTGG AAATCCTTAA TCATCCTGTC AACTTGTCAG GGGAAAATGT CTTACCAGGG TTTGTGTTGG ACTTAACTGA AGTTTGGAAA TAA
|
Protein sequence | MTKTDLSLTL AVNIPPTLTL TVSHEQFVQL ALANRDLQLE RTATGELIVM PPTGSDTGYK NSDINAQLWL WNRQAKLGVV FDSSSGFHLP NGSDRSPDAS WIRQDRWDAL SIEQQETFAP ICPDFVLELR SKNDSIEKLR AKLREYIDNG ARLGWLIDRK NRQVEVYRPG QGVEILNHPV NLSGENVLPG FVLDLTEVWK
|
| |