Gene Ava_4387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4387 
Symbol 
ID3680573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5498245 
End bp5498847 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID637719740 
Producthypothetical protein 
Protein accessionYP_324880 
Protein GI75910584 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00655602 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAAAAA CTGACTTATC CCTGACTCTT GCTGTCAATA TTCCACCTAC ACTAACGCTG 
ACAGTCTCCC ACGAACAATT TGTTCAATTA GCACTGGCTA ACAGAGATTT ACAATTAGAA
CGAACTGCTA CGGGTGAGTT AATTGTTATG CCTCCAACTG GGAGTGATAC AGGGTATAAA
AATTCAGATA TTAACGCCCA ACTGTGGTTA TGGAACCGTC AGGCTAAGTT AGGAGTGGTT
TTTGACTCTT CAAGCGGTTT TCATCTTCCC AATGGTAGCG ATCGCTCTCC TGATGCGTCC
TGGATACGTC AAGACCGATG GGATGCCCTC AGTATAGAAC AACAAGAGAC TTTTGCCCCC
ATATGTCCTG ATTTTGTCCT GGAACTGCGT TCTAAAAATG ACTCTATAGA AAAGTTACGC
GCCAAGTTGA GGGAATACAT CGACAATGGC GCTCGTTTAG GTTGGTTAAT TGACCGCAAA
AATCGACAAG TAGAAGTTTA TCGCCCAGGT CAAGGTGTGG AAATCCTTAA TCATCCTGTC
AACTTGTCAG GGGAAAATGT CTTACCAGGG TTTGTGTTGG ACTTAACTGA AGTTTGGAAA
TAA
 
Protein sequence
MTKTDLSLTL AVNIPPTLTL TVSHEQFVQL ALANRDLQLE RTATGELIVM PPTGSDTGYK 
NSDINAQLWL WNRQAKLGVV FDSSSGFHLP NGSDRSPDAS WIRQDRWDAL SIEQQETFAP
ICPDFVLELR SKNDSIEKLR AKLREYIDNG ARLGWLIDRK NRQVEVYRPG QGVEILNHPV
NLSGENVLPG FVLDLTEVWK