| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4383 |
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| Symbol | |
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| ID | 3680569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5490234 |
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| End bp | 5493269 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637719736 |
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| Product | bacteriocin-processing peptidase |
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| Protein accession | YP_324876 |
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| Protein GI | 75910580 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter
[TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.443877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0633498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCAG GGTTTTCCCG GCAATATTTA GCGGAACAAC TCACCCATAT ACTGGGTGAG
TCTTTGTCAG GACGGGAGTT AGAAAAGTGC ATCCAAAGTT TAGAAATTAT TGAACCACCA
ATCGCCAAAC AATTTTGGCA AGCAGCTACA GCATCGGCCG GGATTTATAT TGTTCTTGGG
GGTAAGGTGA GGCTGCTAGA TAGCGCTCAC AACTTAATTA CTACCCTCTC GACTGGTGCA
TCATTTGGGG AATTAACTCT GTTTCCTGAC GCAGACTTTA TTCCTTATGT CGCTAGAGCT
TCGGTGAACT TGAAAGTGGG TTACCTTCCC CAAGGGATTT TACAAGAGTT GATGGGCGAA
ACTTCCAGTG TTGGCGATCG CCTGAAAAAA CACGCCGAAA CTTGGGATTT GTTGGTGTTG
TGTTGTCAAA ACTCTTTGTT ACCGCAAAAT CCCTCGGTGG AGGAGATAAT CAAAGCCTTA
GCTTTATTTG AGCGCCATAC TTTAGATATT GGCTCCCTAC CATCACAGAT ATTTCCAGAT
ACCAAGTTGT GGATACTGCG TCGCGGAGAA TTGGAGAATA ATAACGGACG CACATTCCAA
CCCGGAACCA TCTCCCAATA TTCAAAGCAA ATAAAGTGGC AAGTAACACA ATCAGCAATT
GTTTACATTC TCAAGCATGG GAATTGGCAA GTGGCGCAGG AGTATTGGCC GGAGTTGGGG
ACTGGGGACT GGGGACTGGG GACTGGGGAA AATGGTTCTC AGTCGCCTTT ACCTAGTATT
CGTCCTCCGG TGGTGAGGGA GCCGGAACCG CAGCCACAAC CAAAACAACG CCGGGCTTAT
TTCCCTAGTC CTCGTATTCA GGTTGGTCAT TGGTGGGGAC GGCTGATTAA GCGCTATCCC
ATATTTGAAC AACAAAGTGC GGCTGATTGT GGTGCGGCTT GTTTGGTGAT GATTAGCCGC
TATTGGGGTA AGCGTTTGAG TGTGAACCGA CTGCGGGATT TAACTAATGT TAATCGCAGT
GGTGCATCCT TGAAGGGTTT AACAGCAGCA GCCGAAACTA TTGGTTTTAC TACCCGTCCG
GTAAAAGCTA GTTTTGATAA ATTAGCACAA CAACCCCTAC CAGCGATCGC TCATTGGGAG
GGTAAACACT ATATTGTAGT TTATGAGATT AACAAAAAAC AGGTAATTGT CGGTGATCCG
GCGATCGGAC AACGTAACCT CAGTATTGGG GAATTTAAAG CGGGTTGGAC TGGTTACGCC
TTGTTGTTGC AACCGACAAC CGACCTCAAA GAAAATGAAG AGGCAAATAC ATCTTTCTGG
CAACTATTTG AGTTAGTCAA ACCCCACACA CGAGTATTAG TAGAGGTATT CAGCGCTTCA
GTATTGATTC AGGTGTTTGG ATTAATTACA CCTTTATTTA CTCAGTTGTT GTTAGATAGG
GTGATTGTCC AAGGCAGCAC CTTGACCTTA AATGCAGTGG GTTTGGGGTT GGTGATATTT
GGCTTATTCC GTGTTGCACT GAGTGGACTA AGACAATATT TGTTAGACCA TACAGCCAAT
CGTATCAGCA TATCCTTACT GGTAGGTTTT ATTAAACATA CCTTTCGTTT ACCTTTATCA
TTTTTTGAGT CGCGCTACGT CGGGGATATT GTTTCTCGCG TCCAAGAAAA CCAAAAAATT
CAACGCTTTT TAACTGGGGA AGCATTGTCA ATCATTTTAG ATTTGTTGAC AGTGTTTATC
TATGTAGCTT TGATGTTTTG GTATAGTTCA GCAATGGCAT TGATGAGTTT AGCGATTGTA
CCGCCTTTTA TGTTATTGGC AATCATCGCT ACACCCTTTT TACGCCGCAT TAGTCGAGAG
GTTTTTAGTG CTACAGCAAA CGAGAATAGT TATCTGATTC AATCCCTTTC TGGTATTCGC
TCAATTCGCT CAATGGCAAT CGAACAGACG GTGCGGTGGC ATTGGGAAGA ACTGCTGAAT
AATGTCATTA GAAAAACCTT CAGTGGGCAG ATAATTAGTA ACAAGCTACA AATTTTCAGT
TCTGCCCTGG AAACTTTGGT AACTACGATT TTACTTTGGT TTGGAGCATG GTTAGTAATC
CAAAACCAAC TAACTATCGG GCAATTAGTC GCCTTTAATA TGTTGTTGGG TAATATTATC
CGTCCATTTC AAAGGCTGGT AGTACTGTGG AATCAATTGC AAGAAGTGGT GATTTCTACA
GAACGAATTA ATGATGTTTT AGAGGCAGAA CCAGAGGAAG ATTTACAACA CCAACATCGG
CAATTTATCA GCAATTTACT GGGTCATATC CGCTTTGAAA ATGTGACATT TCGCTATCAT
CCCGAAAGCG ATCGCAATAT TTTAGAAAAC CTCAGCTTTG AAATCAAGCC AGAGCAAACC
GTGGCTGTGG TAGGGCGGAG TGGTTCCGGC AAAACTACTT TATTTAAACT GATTTTGGGT
CTATACCCTC CGACAGATGG AAAAGTTCTC ATTGATGCCC AAGATGTAAC TAATATAGCT
TTGCGATCGC TCCGTTCACA AATCGGCGTT GTAGACCAAG ATACATTTTT ATTTGGCGGC
ACAATCCGCG AAAATATCAG CATTGCTCAC CCAGAGGCTT CCTTAGAAGA AATTATTGCC
GTTGCCCGCT TAGCAGGTGC GGACGACTTT ATCCAACAAA TGCCAGCAGG TTATGAAACC
CAAATTGGTG AAGGTGGGGG GATGTTGTCT GGTGGACAAA GACAACGTTT AGCGATCGCC
CGTGCTTTGT TAGGAAACCC CCGCCTATTG TTGTTAGATG AAGCTACAAG CCATCTTGAT
GCTGAATCAG AACGCATTAT TCAAAACAAC CTCAAAACCA TTCTCAAAGG GCGCACAAGT
GTCATTATTG CTCACCGCCT GTCCACCGTG CGCCACGCAG ACTTAATTCT GGTATTAGAT
CGCGGCTTAT TAGTCGAAAG CGGTAATCAC GATCAATTAA TTGCCAGAAG AGGGCATTAT
TTTTATCTCA ATCAACAGCA GTTGAGTAAT GAGTAA
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| Protein sequence | MPSGFSRQYL AEQLTHILGE SLSGRELEKC IQSLEIIEPP IAKQFWQAAT ASAGIYIVLG
GKVRLLDSAH NLITTLSTGA SFGELTLFPD ADFIPYVARA SVNLKVGYLP QGILQELMGE
TSSVGDRLKK HAETWDLLVL CCQNSLLPQN PSVEEIIKAL ALFERHTLDI GSLPSQIFPD
TKLWILRRGE LENNNGRTFQ PGTISQYSKQ IKWQVTQSAI VYILKHGNWQ VAQEYWPELG
TGDWGLGTGE NGSQSPLPSI RPPVVREPEP QPQPKQRRAY FPSPRIQVGH WWGRLIKRYP
IFEQQSAADC GAACLVMISR YWGKRLSVNR LRDLTNVNRS GASLKGLTAA AETIGFTTRP
VKASFDKLAQ QPLPAIAHWE GKHYIVVYEI NKKQVIVGDP AIGQRNLSIG EFKAGWTGYA
LLLQPTTDLK ENEEANTSFW QLFELVKPHT RVLVEVFSAS VLIQVFGLIT PLFTQLLLDR
VIVQGSTLTL NAVGLGLVIF GLFRVALSGL RQYLLDHTAN RISISLLVGF IKHTFRLPLS
FFESRYVGDI VSRVQENQKI QRFLTGEALS IILDLLTVFI YVALMFWYSS AMALMSLAIV
PPFMLLAIIA TPFLRRISRE VFSATANENS YLIQSLSGIR SIRSMAIEQT VRWHWEELLN
NVIRKTFSGQ IISNKLQIFS SALETLVTTI LLWFGAWLVI QNQLTIGQLV AFNMLLGNII
RPFQRLVVLW NQLQEVVIST ERINDVLEAE PEEDLQHQHR QFISNLLGHI RFENVTFRYH
PESDRNILEN LSFEIKPEQT VAVVGRSGSG KTTLFKLILG LYPPTDGKVL IDAQDVTNIA
LRSLRSQIGV VDQDTFLFGG TIRENISIAH PEASLEEIIA VARLAGADDF IQQMPAGYET
QIGEGGGMLS GGQRQRLAIA RALLGNPRLL LLDEATSHLD AESERIIQNN LKTILKGRTS
VIIAHRLSTV RHADLILVLD RGLLVESGNH DQLIARRGHY FYLNQQQLSN E
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