Gene Ava_4347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4347 
Symbol 
ID3680689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5454075 
End bp5454785 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content44% 
IMG OID637719700 
Producttwo component transcriptional regulator 
Protein accessionYP_324840 
Protein GI75910544 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACCT CAAGCAGCAT GAGAATTTTA TTGGTTGATG ATGAAGTAGA ACTCACTGTC 
CCCTTAAGCC GTGTGTTAAC TCGTGAAGGT TACACTGTAG AAGCAGCTTA TGAGGGGAAA
AGTGGTAGTG AAATGGCAAC AGTAGGTAAT TATGACCTAC TGATTTTAGA CTGGATGCTA
CCAGGGAAAA CAGGCTTGGA GATATGCCAA GAACTACGTC GCCAAGGAAA AATTACACCC
GTTCTTTTCC TCACCGCCAA AGATACTTTA GATGACCGCG TACAAGGTTT AGATGCTGGT
GCTGATGATT ATTTAGTCAA ACCCTTTGAA CTGCGAGAGT TGTTGGCCAG AGTCCGTGCT
TTATTACGGC GTTCTAGTTC CCAAACCTAT GAAGCTACAC CAGGAAGATT AACTGTAGCC
GACCTAGAAC TGGACTGTGA AAATCAAGTC GCCTACCGTC AAGGACGAGT CATTGAACTA
TCGCAGAAAG AAAGCCAACT GCTGCAATAC TTTATGGAAC ATACGGGACA ACTACTAACT
CACGCCCAAA TTCTGCAACA TTTGTGGGAA GATAACGAAC CACCAAACAG TAATGTCATC
GCCGCATTAA TCAGATTGCT ACGCCGTAAA ATCGAGGTAG GCAAAGAACT TTCCTTAATC
CACACAGTCT ACGGTAAAGG CTATCGCTTC GGTACGTCTT CGGTGGAATG A
 
Protein sequence
MLTSSSMRIL LVDDEVELTV PLSRVLTREG YTVEAAYEGK SGSEMATVGN YDLLILDWML 
PGKTGLEICQ ELRRQGKITP VLFLTAKDTL DDRVQGLDAG ADDYLVKPFE LRELLARVRA
LLRRSSSQTY EATPGRLTVA DLELDCENQV AYRQGRVIEL SQKESQLLQY FMEHTGQLLT
HAQILQHLWE DNEPPNSNVI AALIRLLRRK IEVGKELSLI HTVYGKGYRF GTSSVE