Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4347 |
Symbol | |
ID | 3680689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5454075 |
End bp | 5454785 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637719700 |
Product | two component transcriptional regulator |
Protein accession | YP_324840 |
Protein GI | 75910544 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTACCT CAAGCAGCAT GAGAATTTTA TTGGTTGATG ATGAAGTAGA ACTCACTGTC CCCTTAAGCC GTGTGTTAAC TCGTGAAGGT TACACTGTAG AAGCAGCTTA TGAGGGGAAA AGTGGTAGTG AAATGGCAAC AGTAGGTAAT TATGACCTAC TGATTTTAGA CTGGATGCTA CCAGGGAAAA CAGGCTTGGA GATATGCCAA GAACTACGTC GCCAAGGAAA AATTACACCC GTTCTTTTCC TCACCGCCAA AGATACTTTA GATGACCGCG TACAAGGTTT AGATGCTGGT GCTGATGATT ATTTAGTCAA ACCCTTTGAA CTGCGAGAGT TGTTGGCCAG AGTCCGTGCT TTATTACGGC GTTCTAGTTC CCAAACCTAT GAAGCTACAC CAGGAAGATT AACTGTAGCC GACCTAGAAC TGGACTGTGA AAATCAAGTC GCCTACCGTC AAGGACGAGT CATTGAACTA TCGCAGAAAG AAAGCCAACT GCTGCAATAC TTTATGGAAC ATACGGGACA ACTACTAACT CACGCCCAAA TTCTGCAACA TTTGTGGGAA GATAACGAAC CACCAAACAG TAATGTCATC GCCGCATTAA TCAGATTGCT ACGCCGTAAA ATCGAGGTAG GCAAAGAACT TTCCTTAATC CACACAGTCT ACGGTAAAGG CTATCGCTTC GGTACGTCTT CGGTGGAATG A
|
Protein sequence | MLTSSSMRIL LVDDEVELTV PLSRVLTREG YTVEAAYEGK SGSEMATVGN YDLLILDWML PGKTGLEICQ ELRRQGKITP VLFLTAKDTL DDRVQGLDAG ADDYLVKPFE LRELLARVRA LLRRSSSQTY EATPGRLTVA DLELDCENQV AYRQGRVIEL SQKESQLLQY FMEHTGQLLT HAQILQHLWE DNEPPNSNVI AALIRLLRRK IEVGKELSLI HTVYGKGYRF GTSSVE
|
| |