| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4345 |
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| Symbol | |
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| ID | 3680687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5450358 |
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| End bp | 5453030 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719698 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_324838 |
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| Protein GI | 75910542 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.5665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCC CTTTGCATAA TGAACAGGCG AGACTTGCAG CTTTACGCCA ATATCAAATT
TTAGATACTG AACCGGAGGA AGCTTATGAC AATCTGGCTC AGTTGGCTGC TTTTATCTGC
GGCACACCTA TAGCTTTAGT TAATTTTATT GATGAAAATC GTCAATGGTT TAAGGCCAAA
CTGGGTATAG ACGTACCAGA AATGCCTCGG AGTGTGGGTT TATCCTATCT CTGCCAGGAA
AAGCAAGGTG TCGTTGTCAT ACCAGATACT TTAGCAGACG ATCGCTTCAT TGATAACCCA
GTCGTCAAAT CTTATCCTCA TGTGAGATTT TACGCAGGTG TACCACTGTT AACACCAGAG
GGTCATTTTT TAGGAACTCT CTGTGTGATT GATAATGTAC CGAAACAACT CAATCAGCCA
CAAATTGATG CACTGGCTGC TTTAAGTCGT CTAGTCATTA GTCAGCTAGA ACTGAGACGT
AATGTAGCCC ATGTAGCTCA GGTTAGCGAA CTGTTAATTA AGCATGAGCA AGCGGCGCGT
GCAGAGTCGG AAACGGCTAG AAAGCAGATT GCCAATATAC TGGAAAGTAT CACTGATGCG
TTTTTTGCCA TCGATTATGA ATGGCGATTT ACCTACATCA ATGGTCAAGC TGCCAAGTTG
TTAGAGAAAA CACCAGATGA GCTATTAGGT AAAAGTATCT GGGAGGTGTT TTCAGATACC
TTAGACTCAA CATTCTATCG TGAAACTAGG CGATCGCTCA CCAAACAAAT CAGTGTCAAG
TTTGAAGAGT TTTACCCGCC ACTACACAAA TGGTTTGCTG TTCATGCTTA CCCCAGTAAA
GACGGCTTAT CTGTTTATTT CCAAGATATT AGCGAACGTC GTTACACAGC CGCCGCCCTG
CGCGAGAGTG AGGAACGTTG GCAGTTGGCC TTAATTGGTA ACAATGATGG TATTTGGGAT
TGGAACCTCA AGACTAATGA AGTTTTCTTC TCCTCACGCT GGAAACAAAT GTTGGGGTAT
GAAGATGACG AAATTACTCA CCACGTTGAT GAATGGTCAA AACGGGTGCA TCCCGATGAT
TTCGATTGGG TAATGCAAGC AGTTCAAGAC CATTTGGGGA AAAAAACTCC CTATTATGTT
ACTGAACATC GGGTACGCTG CAAAAATGGT AGTTATAAAT GGATTTTAGA CCGAGGTCAG
GCGCTTTGGG ATGAGGCGGG TAATGCGCTA CGGATGGTAG GTTCCCATAC AGATATTACA
GAACGCAAAC AAACAGAAGA GGAATTAAAA AAACAGAATT TGCGATCGCA ATTATTCGCG
GAAATCACAG TCAAAATCCG GGAAACCCTC GATATTGAAG AGATTTTACG CACATCAGTT
CAGGAAGTGC AGAAACTTTT ACAAGCAGAC CGAGTATTGA TTTTTCGACT CTGGGCTGAT
GGTTCGGGAA CAGTAGTACA AGAATCAGTG TTACCTGGCT GGCCGGTAGT TCTAGGACAA
AATATCCTTG ACCCTTGTTT TCAACAAGAT TACGTCGATA AATATCGCCA AGGGCGAGTC
AGTGCCATAG TAGATGTTAC TAAAGCAGAG ATTCAAGACT GTCATCGAGA ATTTTTGCAA
GGATTTGGCG TAAAAGCTAA CCTGGTAGTT CCTATTCTCA ATCGGGATGG CATTTGGGGT
TTGCTAATTG CCCATCAGTG TACAAATCAC CGTCATTGGA ATAACTCCGA GTTGGAATTA
TTGCAACAAC TAGCCAACCA AATAGGCATT GCTTTATCCC AAGGGCAATT ATTGGAACTC
CAAACTAGGC AAAGTCAGGA ACTAGCTCGT TCTAATACTG AACTGGAAAA TTTTGCCTAT
GTAGCCTCCC ACGATTTACA AGAACCTTTG CGGATGGTGA CTAGTTATTT ACAGTTATTG
GAAAGGAGGT ATAAAAATCA ACTAGATAGC AACGCTGAAC AGTTCATCAC TTACGCCGTT
GATGGTGCTA GGCGGATGCA AACTTTAATC AACGACTTGT TGAATTATTC ACGAGTTACT
ACCCGTGGAC AACCATTTGT CGCCGTTGAC TGTGGAGTTA TTTTACAACG AGCGATCGCC
AATCTCAAAA TAGCGATCGA AGAATCTGGT GCAGTCATCA CCAATGACCC CTTACCTACC
CTCATGGCAG ACCCCACCCA ACTGACCCAG ATTTTTCAAA ACCTCATCGC CAACGCCATC
AAATTTCGCC AAGAAGCCTC ACCAGTGATT CATGTTGGAG TAGGGGAGGT AGGGGGCAGG
GGGCAGGAAG AGAAGTCGCA AGGAGGGTTT CCCTCCGGGC GAACTTCGGG GGCAGGGGAG
GCAGGGGGAG AAAGACCCAA TCCCCAATCC CCAGTCCCCA GTCCCCAATC CCCAGTCCCC
AATCCCCAAT CCCCAGTCCC TAATTCCCAT ACAACCTGGC TATTCTCCGT CCACGACAAT
GGTATCGGTA TAGAACCTCA ATATGCCGAC CGTATTTTTA TCATTTTTCA ACGTCTGCAT
GGTAGAAGTA AATATCCGGG GACAGGCATT GGTTTGGCAA TCTGTAAGAA AATAATAGAG
CGCCACGGTG GTCATATCTG GGTGGAGTCG GAAGCGGGTC AAGGCTCGAC ATTCTACTTC
ACAATTCCAG AACAAACAGG GAAAAAATCG TGA
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| Protein sequence | MKSPLHNEQA RLAALRQYQI LDTEPEEAYD NLAQLAAFIC GTPIALVNFI DENRQWFKAK
LGIDVPEMPR SVGLSYLCQE KQGVVVIPDT LADDRFIDNP VVKSYPHVRF YAGVPLLTPE
GHFLGTLCVI DNVPKQLNQP QIDALAALSR LVISQLELRR NVAHVAQVSE LLIKHEQAAR
AESETARKQI ANILESITDA FFAIDYEWRF TYINGQAAKL LEKTPDELLG KSIWEVFSDT
LDSTFYRETR RSLTKQISVK FEEFYPPLHK WFAVHAYPSK DGLSVYFQDI SERRYTAAAL
RESEERWQLA LIGNNDGIWD WNLKTNEVFF SSRWKQMLGY EDDEITHHVD EWSKRVHPDD
FDWVMQAVQD HLGKKTPYYV TEHRVRCKNG SYKWILDRGQ ALWDEAGNAL RMVGSHTDIT
ERKQTEEELK KQNLRSQLFA EITVKIRETL DIEEILRTSV QEVQKLLQAD RVLIFRLWAD
GSGTVVQESV LPGWPVVLGQ NILDPCFQQD YVDKYRQGRV SAIVDVTKAE IQDCHREFLQ
GFGVKANLVV PILNRDGIWG LLIAHQCTNH RHWNNSELEL LQQLANQIGI ALSQGQLLEL
QTRQSQELAR SNTELENFAY VASHDLQEPL RMVTSYLQLL ERRYKNQLDS NAEQFITYAV
DGARRMQTLI NDLLNYSRVT TRGQPFVAVD CGVILQRAIA NLKIAIEESG AVITNDPLPT
LMADPTQLTQ IFQNLIANAI KFRQEASPVI HVGVGEVGGR GQEEKSQGGF PSGRTSGAGE
AGGERPNPQS PVPSPQSPVP NPQSPVPNSH TTWLFSVHDN GIGIEPQYAD RIFIIFQRLH
GRSKYPGTGI GLAICKKIIE RHGGHIWVES EAGQGSTFYF TIPEQTGKKS
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