Gene Ava_4333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4333 
Symbol 
ID3680767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5429587 
End bp5430243 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content39% 
IMG OID637719681 
ProductHAD family hydrolase 
Protein accessionYP_324826 
Protein GI75910530 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTATT CCGCCATTTT GTTTGATTTA GATGGGACTT TGACAGACCC CAAATTGGGT 
ATTACTCGCT GTATTCAGTA TGCGTTATCG GAATTAGGTT ACAAACCACC TGATGCTGAT
GAGTTGCTAT GGTGTATCGG CCCTCCCATT AAAGAGAGTT TTTCTCGGCT ACTGGAAACT
TCAGATAACG GCTTGATTGA TCAGGCGATC GCCCTTTATC GTCGTCGTTT TTCGACGATT
GGATTATTTG AAAATTCCCT TTATCCCCAA ATTATAGATA TTCTCCAAAA GATCAGATTT
GCTGGTTATC AAACTTTTGT CGCAACTTCT AAACCTCACA TTTATGCAAA GCAAATTATT
GAACATTTTG ATTTATCGTT GCTTTTCGAT GCTGTTTATG GTAGCGAACT TGATGGAACA
AGAACTGTGA AAGGTGAGTT GATTCAGCAT ATTTTAATCA CAGAAAATCT TACACCTTCT
ACTGTGGTCA TGGTAGGCGA TCGCCAACAC GATATCATCG GAGCCAAGCT GCACAATTTG
ACGGCAATTG GTGTGACTTA TGGCTATGGA ACTGAGGAGG AATTAAAAAC TCACGGTGCT
GATTTAATTG CCCATTCTCC AGAGGAAATT AAAAAATTAT TAGTTCATAG CTCTTAA
 
Protein sequence
MPYSAILFDL DGTLTDPKLG ITRCIQYALS ELGYKPPDAD ELLWCIGPPI KESFSRLLET 
SDNGLIDQAI ALYRRRFSTI GLFENSLYPQ IIDILQKIRF AGYQTFVATS KPHIYAKQII
EHFDLSLLFD AVYGSELDGT RTVKGELIQH ILITENLTPS TVVMVGDRQH DIIGAKLHNL
TAIGVTYGYG TEEELKTHGA DLIAHSPEEI KKLLVHSS