Gene Ava_4332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4332 
Symbol 
ID3680766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5428821 
End bp5429540 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content45% 
IMG OID637719680 
ProductThiJ/PfpI 
Protein accessionYP_324825 
Protein GI75910529 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACTG CACAACCAAC CTCTTCCCTA TCTATTGGTA TCGTACTATT CCCCAATGTG 
ACACAGTTAG ATTTCACCGC TCCCTACGAA GTCTTTAACC GACTACCAAA CACAAAACTA
TATCTGCTGT CTGAGACTCT AGAACCTATA AGGAGTGATG GCGGACTCAC TTTTTTGCCT
GACACCACAT TTGCCGAGTC GCCACTTGTA GATTTGTTGT TCGTCCCAGG AGGGAGCGGT
ATTGATGTCA AACTAGAAGA CAAGAAATTT CTCGCCTTTC TGAAAACTCA AGGTGAACAA
GCCCGTTATG TGACATCTGT TTGTACTGGT GCGCTACTGT TGGCGGCGGC TGGGTTACTC
CAAGGGTATC GCGCCACTAC TCACTGGCTC TACCTAGATT TGTTGGAATT ACTGGGAGTT
GAAGTAGTCA AACAGAGAGT TGTCATTGAT CGCAATCGGA TTACAGGGGG AGGTGTAACA
GCAGGAATCG ACTTTGGACT AGTTATAGCT GGGGAATTAT TCACAGAAGC GATCGCCCAA
TCAATTCAAC TAGCCATAGA ATACAATCCC CAACCACCCT TTGAAAGCGG TTCGCCGGAA
ACTGCACCAG AGTACATCAT CAACAGCGTC AAAGCTACTA GCAAAAATCG TCTAGATAGC
CGTCGGCAAA TCATCCAAAA GATAGTTGCT GAATCATCAA TTTCTATATC TCAAAAGTAA
 
Protein sequence
MTTAQPTSSL SIGIVLFPNV TQLDFTAPYE VFNRLPNTKL YLLSETLEPI RSDGGLTFLP 
DTTFAESPLV DLLFVPGGSG IDVKLEDKKF LAFLKTQGEQ ARYVTSVCTG ALLLAAAGLL
QGYRATTHWL YLDLLELLGV EVVKQRVVID RNRITGGGVT AGIDFGLVIA GELFTEAIAQ
SIQLAIEYNP QPPFESGSPE TAPEYIINSV KATSKNRLDS RRQIIQKIVA ESSISISQK