Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4332 |
Symbol | |
ID | 3680766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5428821 |
End bp | 5429540 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637719680 |
Product | ThiJ/PfpI |
Protein accession | YP_324825 |
Protein GI | 75910529 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACTG CACAACCAAC CTCTTCCCTA TCTATTGGTA TCGTACTATT CCCCAATGTG ACACAGTTAG ATTTCACCGC TCCCTACGAA GTCTTTAACC GACTACCAAA CACAAAACTA TATCTGCTGT CTGAGACTCT AGAACCTATA AGGAGTGATG GCGGACTCAC TTTTTTGCCT GACACCACAT TTGCCGAGTC GCCACTTGTA GATTTGTTGT TCGTCCCAGG AGGGAGCGGT ATTGATGTCA AACTAGAAGA CAAGAAATTT CTCGCCTTTC TGAAAACTCA AGGTGAACAA GCCCGTTATG TGACATCTGT TTGTACTGGT GCGCTACTGT TGGCGGCGGC TGGGTTACTC CAAGGGTATC GCGCCACTAC TCACTGGCTC TACCTAGATT TGTTGGAATT ACTGGGAGTT GAAGTAGTCA AACAGAGAGT TGTCATTGAT CGCAATCGGA TTACAGGGGG AGGTGTAACA GCAGGAATCG ACTTTGGACT AGTTATAGCT GGGGAATTAT TCACAGAAGC GATCGCCCAA TCAATTCAAC TAGCCATAGA ATACAATCCC CAACCACCCT TTGAAAGCGG TTCGCCGGAA ACTGCACCAG AGTACATCAT CAACAGCGTC AAAGCTACTA GCAAAAATCG TCTAGATAGC CGTCGGCAAA TCATCCAAAA GATAGTTGCT GAATCATCAA TTTCTATATC TCAAAAGTAA
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Protein sequence | MTTAQPTSSL SIGIVLFPNV TQLDFTAPYE VFNRLPNTKL YLLSETLEPI RSDGGLTFLP DTTFAESPLV DLLFVPGGSG IDVKLEDKKF LAFLKTQGEQ ARYVTSVCTG ALLLAAAGLL QGYRATTHWL YLDLLELLGV EVVKQRVVID RNRITGGGVT AGIDFGLVIA GELFTEAIAQ SIQLAIEYNP QPPFESGSPE TAPEYIINSV KATSKNRLDS RRQIIQKIVA ESSISISQK
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