| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4317 |
|---|
| Symbol | |
|---|
| ID | 3680829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5407465 |
|---|
| End bp | 5408121 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637719665 |
|---|
| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
|---|
| Protein accession | YP_324810 |
|---|
| Protein GI | 75910514 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.416594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAT TTGTAGCAGG GGCAACAGGT GAAACAGGTC GCCGCATCGT CCAAGAGTTG
ATAGCGCGAA ATATTCCTGT ACGTGCTTTG GTACGAGATG AACACACAGC TAGAGCTATT
TTGCCTCCTG ATACAGAATT AGTGGTGGGT GACGTGTTAA ACCCAGCTAG TCTAACTGCG
GCTTTGGGTG ATAGTACAGT GGTGTTGTGT GCGACTGGCG CAAAACCAAG TTTTGACCCT
ACCGGGCCTT ATAAAGTAGA TTTTGAAGGC ACTAAAAATT TAGTGGATGT GGCAAAAGCC
AAGGGAATTG AAAATTTTGT CCTAGTAACT TCTTTGTGTG TATCCCAGTT TTTCCATCCA
TTGAACTTAT TTTGGCTAAT TCTGGTGTGG AAAAAACAAG CGGAAGAGTA TCTGCAAAAA
AGCGGACTTA CTTATACGAT AGTTCGTCCC GGTGGTTTGA AGAATGAGGA TAACTCAGAT
GCGATCGTTA TGCAAAGTGC TGATACTTTA TTTGATGGTA GTATTCCTCG GCAGAAAGTA
GCCCAAGTCT GCGTCGAGTC CTTGTTTGAG CCAGGCGCAC GCAATAAAAT AGTTGAAATT
GTCGCTAAAC CAGAAGCTAG TTCCAAAACT TTTACAGAAT TATTTCAACA GTGTTAG
|
|---|
| Protein sequence | MKAFVAGATG ETGRRIVQEL IARNIPVRAL VRDEHTARAI LPPDTELVVG DVLNPASLTA
ALGDSTVVLC ATGAKPSFDP TGPYKVDFEG TKNLVDVAKA KGIENFVLVT SLCVSQFFHP
LNLFWLILVW KKQAEEYLQK SGLTYTIVRP GGLKNEDNSD AIVMQSADTL FDGSIPRQKV
AQVCVESLFE PGARNKIVEI VAKPEASSKT FTELFQQC
|
|---|
| |