| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4316 |
|---|
| Symbol | |
|---|
| ID | 3680828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 5406624 |
|---|
| End bp | 5407289 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637719664 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_324809 |
|---|
| Protein GI | 75910513 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.737281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCAA CAAACGGCGA ATATCAATCT TTGGATATCA CAGAAACAAC TGTGCCTGTT
GTTCCCAATT TCCCAGAAAC TGAGGATGCA GACACAGGAT TGAGTGCTGG TACACTAAGT
AAATTTTACG GTCGCTATAG CGACTCGATG GAAATGTATG CTCCAGCACA AAAAGTTGCT
GAGTATCTGA ATTGTCACGC TTCTTGGTTT ACACGCTGTG CCGAACCAAT GAAAGTGCAA
CCTCTAGGAG AACATGGTTA TGCTCTAACT ATTGGTCGTT TTGGCTCTTT TGGTTATGAA
GTCGAACCAA AGATTGGTTT GGAATTGTTA CCGCCACAAG AGGGTATTTA TTGCATCCGG
ACAATTCCCA TTCCTGATTA TCAACCACCT GGTTATGATG TAGATTATCG AGCTGCGCTT
CAATTAAGAG AAGATTTTGG TGAACACACC GTTACAAAAG TTGAATGGGA ATTAGATTTA
ACTGTTTGTC TCCACTTTCC ACGATTTATT CAGCGTTTGC CTAAGTCTTT AATTCAGTCT
ACAGGCGATC GCTTACTCAA CCAAATTGTT CGCCAAGTTT CCCGCCGCCT AACTCGCAAA
GTTCAAGAAG ATTTTCACCA ATCTGTTGGA GTTCCTTTTC CTGGTAATTG TCAGAAAAAG
CGGTAA
|
|---|
| Protein sequence | MLSTNGEYQS LDITETTVPV VPNFPETEDA DTGLSAGTLS KFYGRYSDSM EMYAPAQKVA
EYLNCHASWF TRCAEPMKVQ PLGEHGYALT IGRFGSFGYE VEPKIGLELL PPQEGIYCIR
TIPIPDYQPP GYDVDYRAAL QLREDFGEHT VTKVEWELDL TVCLHFPRFI QRLPKSLIQS
TGDRLLNQIV RQVSRRLTRK VQEDFHQSVG VPFPGNCQKK R
|
|---|
| |