Gene Ava_4280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4280 
Symbol 
ID3680831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5365674 
End bp5366912 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content44% 
IMG OID637719629 
Producthypothetical protein 
Protein accessionYP_324774 
Protein GI75910478 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGGGT TGATTGCTTT TGCTTTGGAG GAATGTCGCA CTAAAACCCT CAGTTTATTT 
GCAGGTATGG ATGCAGCTAC ATTCTGTTGT CAACCTCATG CTGATTTCAG TCCTGTGGGT
TGGCATTTGG GACATATTGC CTATATAGAA TCTCTGTGGG TATTAGAACA TAGTGCTGAT
TTACCATGCT TATTTCCCCA ATATCGTCAG TTATTCGCAG CTGATGGTTT ACCGAAAACG
CAACGAGTCC AATTACCAGA AATAGCAGAA ATTATTTATT ACTTGGATAC AGTGAGAGCA
AAAGTGCTGG AATATCTAGA AGTAGCTGAT ATCCTACAGC AAGAACGACT TTGGCGCTTT
TTAATTCAGC ACGAAAGCCA ACACTGCGAA ATCATCACTA TGGTGTTGGA ATTGCTTGAT
GGTCAACGGT CAATGGTCAA TGGTCAACGG TCAACGGTCA ATGGTCAAAC CTTAAATTCT
GTGGGGGAGA TGGTGGAAAT TCCCGCAGGT GAGTTTGAGT TGGGTAACGA TTCCATTGAT
GCTTTAGATA ATGAGCGTCC GGCACATAGA GTTTATTTAG ATACTTACTG GATTGACCGC
TACCCTGTGA CTTGTGGTGA ATATTGGATA TTTATGGAGG CTGGAGGGTA TCAAAACCCT
GAATGGTGGT CAGTAGCAGG TTGGGAATGG TTACAAACGG AGCAAGTAAT ACAACCACTT
TACTGGAATC GCCTAAGCTC TACCACAGAG AATCACCCAG TATATGGTGT TAGTTGGTAT
GAAGCCGAAG CTTATGCACG GTTTGTTGGT AAGCGTTTAC CCACAGAGGC TGAATGGGAA
AAAGCCGCAA GTTGGAATGT CAAAGCTAAC TGTCGCCACA CCTACCCTTG GGGGGAAGAT
ATCCCCACAC CTCAAAATTG TAATTGTGAT GGACTACGAC GAGGTTTAGG CGATAAAACC
ACCCCAGTCA ATGCTTACCC GGCTGGGCAG AGTGCCTATG GTGTATATGA CACTTTAGGA
AATGTTTGGG AGTGGACAGC ATCTTGGTTT GATGGTTACA AAGGTTTTCA AAGTTACCCA
TACAAAGGTT ACGCGCAAGT TTATTTTGAC CAAAAACATC GTGTGTTAAA AGGCGGTAGT
TGGGCAACTC GTCCTTGGGT GCTACGTTCT AGTTTCCGCA ATTGGTATCA TCCCCAAGTT
CGTCAGATTT TTGCTGGGTT TCGTTGTGTG AGGGATTAA
 
Protein sequence
MKGLIAFALE ECRTKTLSLF AGMDAATFCC QPHADFSPVG WHLGHIAYIE SLWVLEHSAD 
LPCLFPQYRQ LFAADGLPKT QRVQLPEIAE IIYYLDTVRA KVLEYLEVAD ILQQERLWRF
LIQHESQHCE IITMVLELLD GQRSMVNGQR STVNGQTLNS VGEMVEIPAG EFELGNDSID
ALDNERPAHR VYLDTYWIDR YPVTCGEYWI FMEAGGYQNP EWWSVAGWEW LQTEQVIQPL
YWNRLSSTTE NHPVYGVSWY EAEAYARFVG KRLPTEAEWE KAASWNVKAN CRHTYPWGED
IPTPQNCNCD GLRRGLGDKT TPVNAYPAGQ SAYGVYDTLG NVWEWTASWF DGYKGFQSYP
YKGYAQVYFD QKHRVLKGGS WATRPWVLRS SFRNWYHPQV RQIFAGFRCV RD