Gene Ava_4245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4245 
Symbol 
ID3680893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5324521 
End bp5325717 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content47% 
IMG OID637719593 
Productaromatic amino acid beta-eliminating lyase/threonine aldolase 
Protein accessionYP_324739 
Protein GI75910443 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGA TTTATTTAGA TAACAATGCC ACAACTCAGG TAGATGCAGA AGTTCTAGCG 
GCGATGCTGC CTTACCTCAC CGAGTTTTAC GGCAATCCTT CATCAATGCA CACCTTTGGC
GGACAAGTAG GTAAAGCTGT ACAACAAGCT AGGGGGCAAG TTGCTTTCTT GTTGGGAGCA
GAAGAATCAG AAATTATCTT TACCAGTTGC GGTACTGAGG GCAACAATGC AGCTATCAAG
GCAGCTTTAG CCGCACAACC GGAAAAGCGT CATATTATTA CTACTCAGGT AGAACACGCA
GCCATAATTA ATGTCTGCAA ACAACTGGAA AAACAAGGTT ATAAAGTTAC CTATTTATCT
GTAGATAGTC AGGGACAAAT TGATTTGCTG GAACTAGAAG CAGCCTTGAC CGGCGATACG
GCTTTAGTTT CCACCATGTA CGCTAATAAT GAAACTGGCG TAGTATTCCC CATCGAACAG
ATTGGGTTAC GGGCGAAAGA TGCAGGCGCT ATCTTCCATG TCGATGCAGT GCAAGCGGTG
GGGAAAGTTC CCCTCAACCT CAAAACTAGC AGCATTGATA TGCTTACCCT CTCCGGTCAC
AAACTCCATG CACCCAAAGG TATCGGTGCG CTGTATATTA GACGCGGTGT GAGATTTCGT
CCTCTGTTAG TGGGTGGACA CCAAGAGCGA GGACGCAGAG CAGGTACAGA GAATGTTCCA
GGGATGATTG CCTTGGGTAA AGCGGCAGAA TTAGCCCAGA TACACTTAAA AGATGTGAAG
CGGGAAAAGG CATTACGCGA TCGCCTGGAA CAAGGTTTAC TATCGGCAAT TCCCAATACC
GAAGTCAACG GTCATCCTAC TTCTAGATTG TCCAACACTA CCAATATCGG TTTCAAATAC
ATCGAAGGCG AAGCGATTCT CCTCTCCCTC AATAAATACG GCATCTGTGC ATCTTCGGGT
TCTGCCTGTA CTTCTGGTTC TTTAGAATCT TCCCATGTTT TACGGGCTAT GGGCTTACCC
TATACCATTC TCCACGGTTC GATTCGCTTC AGCCTTTCAC GCTACACCAC TGAAGCAGAA
ATAGATAAAG TCCTCCAACT CATGCCCCCA ATTGTTGAAC GTCTGCGGGC TATCTCTCCC
TTTAGTAATG ACCAAGCTGA TTGGTTGCAA GGAAGGGAGG AAGCGTTGGC TCATTGA
 
Protein sequence
MSVIYLDNNA TTQVDAEVLA AMLPYLTEFY GNPSSMHTFG GQVGKAVQQA RGQVAFLLGA 
EESEIIFTSC GTEGNNAAIK AALAAQPEKR HIITTQVEHA AIINVCKQLE KQGYKVTYLS
VDSQGQIDLL ELEAALTGDT ALVSTMYANN ETGVVFPIEQ IGLRAKDAGA IFHVDAVQAV
GKVPLNLKTS SIDMLTLSGH KLHAPKGIGA LYIRRGVRFR PLLVGGHQER GRRAGTENVP
GMIALGKAAE LAQIHLKDVK REKALRDRLE QGLLSAIPNT EVNGHPTSRL SNTTNIGFKY
IEGEAILLSL NKYGICASSG SACTSGSLES SHVLRAMGLP YTILHGSIRF SLSRYTTEAE
IDKVLQLMPP IVERLRAISP FSNDQADWLQ GREEALAH