Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4245 |
Symbol | |
ID | 3680893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5324521 |
End bp | 5325717 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637719593 |
Product | aromatic amino acid beta-eliminating lyase/threonine aldolase |
Protein accession | YP_324739 |
Protein GI | 75910443 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGA TTTATTTAGA TAACAATGCC ACAACTCAGG TAGATGCAGA AGTTCTAGCG GCGATGCTGC CTTACCTCAC CGAGTTTTAC GGCAATCCTT CATCAATGCA CACCTTTGGC GGACAAGTAG GTAAAGCTGT ACAACAAGCT AGGGGGCAAG TTGCTTTCTT GTTGGGAGCA GAAGAATCAG AAATTATCTT TACCAGTTGC GGTACTGAGG GCAACAATGC AGCTATCAAG GCAGCTTTAG CCGCACAACC GGAAAAGCGT CATATTATTA CTACTCAGGT AGAACACGCA GCCATAATTA ATGTCTGCAA ACAACTGGAA AAACAAGGTT ATAAAGTTAC CTATTTATCT GTAGATAGTC AGGGACAAAT TGATTTGCTG GAACTAGAAG CAGCCTTGAC CGGCGATACG GCTTTAGTTT CCACCATGTA CGCTAATAAT GAAACTGGCG TAGTATTCCC CATCGAACAG ATTGGGTTAC GGGCGAAAGA TGCAGGCGCT ATCTTCCATG TCGATGCAGT GCAAGCGGTG GGGAAAGTTC CCCTCAACCT CAAAACTAGC AGCATTGATA TGCTTACCCT CTCCGGTCAC AAACTCCATG CACCCAAAGG TATCGGTGCG CTGTATATTA GACGCGGTGT GAGATTTCGT CCTCTGTTAG TGGGTGGACA CCAAGAGCGA GGACGCAGAG CAGGTACAGA GAATGTTCCA GGGATGATTG CCTTGGGTAA AGCGGCAGAA TTAGCCCAGA TACACTTAAA AGATGTGAAG CGGGAAAAGG CATTACGCGA TCGCCTGGAA CAAGGTTTAC TATCGGCAAT TCCCAATACC GAAGTCAACG GTCATCCTAC TTCTAGATTG TCCAACACTA CCAATATCGG TTTCAAATAC ATCGAAGGCG AAGCGATTCT CCTCTCCCTC AATAAATACG GCATCTGTGC ATCTTCGGGT TCTGCCTGTA CTTCTGGTTC TTTAGAATCT TCCCATGTTT TACGGGCTAT GGGCTTACCC TATACCATTC TCCACGGTTC GATTCGCTTC AGCCTTTCAC GCTACACCAC TGAAGCAGAA ATAGATAAAG TCCTCCAACT CATGCCCCCA ATTGTTGAAC GTCTGCGGGC TATCTCTCCC TTTAGTAATG ACCAAGCTGA TTGGTTGCAA GGAAGGGAGG AAGCGTTGGC TCATTGA
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Protein sequence | MSVIYLDNNA TTQVDAEVLA AMLPYLTEFY GNPSSMHTFG GQVGKAVQQA RGQVAFLLGA EESEIIFTSC GTEGNNAAIK AALAAQPEKR HIITTQVEHA AIINVCKQLE KQGYKVTYLS VDSQGQIDLL ELEAALTGDT ALVSTMYANN ETGVVFPIEQ IGLRAKDAGA IFHVDAVQAV GKVPLNLKTS SIDMLTLSGH KLHAPKGIGA LYIRRGVRFR PLLVGGHQER GRRAGTENVP GMIALGKAAE LAQIHLKDVK REKALRDRLE QGLLSAIPNT EVNGHPTSRL SNTTNIGFKY IEGEAILLSL NKYGICASSG SACTSGSLES SHVLRAMGLP YTILHGSIRF SLSRYTTEAE IDKVLQLMPP IVERLRAISP FSNDQADWLQ GREEALAH
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