Gene Ava_4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4228 
Symbol 
ID3680934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5303874 
End bp5305955 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content46% 
IMG OID637719576 
Producthypothetical protein 
Protein accessionYP_324722 
Protein GI75910426 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAATA CGCCTATTAC CACAGTCTAT GTCAACCCAG CAACGGGGAA TGACGCTAAC 
ACGGGTTCAC GGCAAAGTCC GTTTAAAACC CTGACCCGTG CTTTAAAAGC CACTCCACCA
ACGATTGTCC AACTGAGTGC TGGGACTTAT AACACCGCAA ATAAAGAAGT CTTTCCCTTG
GTTATTCCTG AGGGGGTAAC GGTGGTGGGG AACGAAGCCA GCAAAGGTGC AGGAATTTTG
ATTTCTGGGG GGGGAGAGTA TCAAAGCCCT AGTTTTAGTG TGCAGAATGT CACCTTAGTT
TTACTCAGTC AAGCCAGTCT GCGGGGTGTG ACTGTCACCA ATCCTATAGC TAAGGGGACT
GGTGTGTGGA TTGAATCAAC TGCACCTAAT ATTGCTAATA ATACTTTTAC TAATTGTGGT
CGGGAAGGTG TATTTACTAG CGGTACAGCC AAACCAGCGA TTTTAGATAA TGTGTTTGTG
CAGAATACGG CTAGTGGTTT ATTTATGGCA CGTAACAGCA AAGGAGAAGT ATTGCGGAAT
GTGTTCCAAA AGAATCCTTT AGGTATCGCT ATCAGTGACT TTGCTGCACC TTTACTCGTT
AATAACAAAC TATCAGAAAA TCGGACAGCG ATCGCTCTTT CTCGCAATGC TCGTCCTGTA
CTACGTCATA ATTTACTCAT CAAAAATACC CAATGTGGAT TATTAATCAA TGAAAACGCC
CTCCCTGACT TGGGTAGCAG CCAAGATACA GCCGGCAATA TTTTTAGTAA TAATGGTGAG
TTTGATATAC AAAATGCTAC AACGCAAAAA TTAGTTTCTG TAGGCAATCA GTTAAATCCC
ACCCAAGTCA AGGGATTGGT GGAATTTCCC GCCGCCATCA TCGATATTCC CGTACAGTTG
GCTAACACTC GTTTTCTTGA CCTAGCTGGA CATTGGGCAA CCGCTTTTGT AGAAGCGTTG
GTAAACAAAG GCTTAATGAG TGGCTTTCCC GATGGCACAT TTGCCCCCGA TGCACCAATC
ACCCGCGCCC AATATGCGGC GGTGATTGCC AAAACCTTTC AACTCCCCGC CAACAATCAG
CCGCCCAAAT TCACCGATAT CAAATCAGAT TTCTGGGCAG CATCAGCCAT CACCAAAGCC
GCCCAAATGG GATTTATTAG CGGTTTTCCT GATGGAACCT TTCGCCCCAT GCAGAACTTA
AGCAAAGTCC AAGCAATCGT CTCCATTGTC AATGGTCTGA AATTAACTGG AGGTAGCCCC
AATGTGTTAA CTGTATACCG CGATCGCGCC CAAATTCCCA GTTATGCCAC AAACCCCCTC
GCCGTCGCCA CCCAAAACAG CTTGGTTGTC AACTATCCCC AAACCGATAG ACTAGAACCA
CTGCGAGATA TCACCCGCGC CGAGATAGGG GCTTTAATTT ATCAGGCATT AGTAGCTAAT
GGGCAAGAAA AAGCCATAGC TTCACCATAT ATAGTCAGCC CTGAAGTTGA TACTTCCTCC
TTCACAGACC TGACAGGACA TTGGGCTGAA CCATTCATTC GTGGTTTAGC CAGTATGGGG
ATCACCAGTG GTTTTGCTGA TGGTAGCTAT CAACCCAACA AACCCATGAC CCGCGCCCAA
TATGCGGCGA TGGTAGCAGT AGCCTTTAAC CCACCAGCTA GAAGACCAGC CACAGATTTT
GCTGACGTAC CCAAGAATTT TTGGGCATAC AAAGCCTTAC AAATCGCCGC TAGTGGCGGC
TTCGTCAGTG GTTTTAGCGA TCGCACCTTT CGCCCCGACC AAAACGTCCA GAGGCTACAG
GTCATCGTCT CTCTAGTTAA CGGATTAGCT CTATCGACAG TTGATAGCAA TAACTTACTC
ATCTACACTG ACAATAATAA TATTCCTGAA TATGCTCGCA AAGCCGTGGT TACAGCAACA
CAACAGAAAA TTACTGTCAA CTATCCAGAC CCGAAACAGC TAGCACCAAC CAGAGAAGCC
ACCAGGGCAG AAGTAGCCGC AATGGTCTAT CAAGCCTTAG TCGCCATACA GAGAGCGCCA
AGTATTAATT CACCCTATAT TATTTCGACA GTTAGCAGTT GA
 
Protein sequence
MNNTPITTVY VNPATGNDAN TGSRQSPFKT LTRALKATPP TIVQLSAGTY NTANKEVFPL 
VIPEGVTVVG NEASKGAGIL ISGGGEYQSP SFSVQNVTLV LLSQASLRGV TVTNPIAKGT
GVWIESTAPN IANNTFTNCG REGVFTSGTA KPAILDNVFV QNTASGLFMA RNSKGEVLRN
VFQKNPLGIA ISDFAAPLLV NNKLSENRTA IALSRNARPV LRHNLLIKNT QCGLLINENA
LPDLGSSQDT AGNIFSNNGE FDIQNATTQK LVSVGNQLNP TQVKGLVEFP AAIIDIPVQL
ANTRFLDLAG HWATAFVEAL VNKGLMSGFP DGTFAPDAPI TRAQYAAVIA KTFQLPANNQ
PPKFTDIKSD FWAASAITKA AQMGFISGFP DGTFRPMQNL SKVQAIVSIV NGLKLTGGSP
NVLTVYRDRA QIPSYATNPL AVATQNSLVV NYPQTDRLEP LRDITRAEIG ALIYQALVAN
GQEKAIASPY IVSPEVDTSS FTDLTGHWAE PFIRGLASMG ITSGFADGSY QPNKPMTRAQ
YAAMVAVAFN PPARRPATDF ADVPKNFWAY KALQIAASGG FVSGFSDRTF RPDQNVQRLQ
VIVSLVNGLA LSTVDSNNLL IYTDNNNIPE YARKAVVTAT QQKITVNYPD PKQLAPTREA
TRAEVAAMVY QALVAIQRAP SINSPYIIST VSS