Gene Ava_4211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4211 
Symbol 
ID3680955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5281066 
End bp5282118 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content41% 
IMG OID637719558 
ProductFatty acid desaturase 
Protein accessionYP_324705 
Protein GI75910409 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAT CAATCATCAA AAATCAGGAA ATAAAAAATA AGCTTAGTAA TCCCGAACTA 
AGGCTCAAAG ATATTATTAA AACTCTGCCA AAAGAATGTT TTCAGCAGAA CCGTCGCAAA
GCGTGGACAC AAGCACTACT CAGTGTTGTC ATGGTTGGTT TAGGTTACTG GAGTTTGGCG
ATCGCACCTT GGTTTCTTTT ACCCATTGCC TGGATTTTTA CAGGTACTGC TTTAACAGGT
TTTTTTGTGA TTGGTCATGA TTGTGGACAT CGTTCATTTG CCAAACGTCG TTGGGTAAAT
GACTTGGTAG GGCATATATT TATGATGCCG TTAATATATC CCTTTCATAG CTGGCGGATT
AAGCATAATC ACCACCACAA GCACACCAAC AAGTTAGACG AAGACAATGC TTGGCATCCT
ATCAGACCAG AAGTGTTTGC CAGTTGGGGT AAAACTCGTC AGTCTGCCTT TAAGTTGTTT
ATGCGTCAAA GGCTTTGGTG GGTAGGTTCA ATTGGACATT GGGCTGTCGT GCATTTCGAT
TGGCGGAAGT TCAAAGTTAA AGACCAAGCT GATGTGAAAC TTTCTGTTGC TGTAGTAGTT
TTATTTGCCG CAGTTGCTTT TCCCACCCTC ATCGCTACAA CTGGTATTTG GGGATTTGTA
AAATTTTGGT TTGTGCCTTG GCTGGGTTAT CATTTCTGGA TGAGTACCTT CACCATTGTT
CACCATACAT TTCCAGATGT TCCTTTTGAA ACAGAGAACA AATGGCATGA AGCTATGGCA
CAGTTATTTG GGACTATTCA TTGTGATTAT CCCAAATGGG TAGAAGTGTT GTGTCACGAT
ATTAACGTCC ACGTTCCTCA TCACCTTTCT ACCGCTATTC CCTCTTATAA TTTGCGGTTA
GCTTACAGCA GCATTAAAGA AAATTGGGGT GATTATCTAC ATGATGAACT TCGCTTTTCT
TGGTCTTTAA TGAAGTTCAT TACTGACGAA TGTCAACTGT ATCGAACTGA TGTTGGCTAT
CAGCCTTTTA AAGATTATTA CGCAGGACGA TAG
 
Protein sequence
MTTSIIKNQE IKNKLSNPEL RLKDIIKTLP KECFQQNRRK AWTQALLSVV MVGLGYWSLA 
IAPWFLLPIA WIFTGTALTG FFVIGHDCGH RSFAKRRWVN DLVGHIFMMP LIYPFHSWRI
KHNHHHKHTN KLDEDNAWHP IRPEVFASWG KTRQSAFKLF MRQRLWWVGS IGHWAVVHFD
WRKFKVKDQA DVKLSVAVVV LFAAVAFPTL IATTGIWGFV KFWFVPWLGY HFWMSTFTIV
HHTFPDVPFE TENKWHEAMA QLFGTIHCDY PKWVEVLCHD INVHVPHHLS TAIPSYNLRL
AYSSIKENWG DYLHDELRFS WSLMKFITDE CQLYRTDVGY QPFKDYYAGR