| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4130 |
|---|
| Symbol | |
|---|
| ID | 3681206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5143696 |
|---|
| End bp | 5145288 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637719476 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_324624 |
|---|
| Protein GI | 75910328 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00507344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGATT ACCATAATGT TCAGAAGTTC CTGCAAAGTC GGATCAAGCG ACGCAACTTA
ATCATTGGTG GGGGAGCATT CACTGGTTTA GCTATTGCCA GCCAATTTTC TCATCAAAGA
GCGATCGCTA GAGGCAGATT TTCCGATTAT CCCTTTAAAC TGGGTGTGGC ATCAGGCGAA
CCCTACGACA CTAGCGTTGT CATCTGGACT CGTTTAGCGC CTGAACCTTT AAATGGCGGT
GGAATGCCAC CTGTGAATGT GCCGATTCGC TGGGAAGTAG CCACTGACTC TAACATGAAG
CGCATTATCT CCAGGGGAAC TGTACTGGCA ACTCCTGAAC TAGCTCACTC TGTAAGAGTA
GTAGTAGAAG GACTCTCACC CCATACTTGG TATTGGTATC GCTTTAACGT TGGTAACGAA
GCTAGTCCTA TTGGCCGGAC TCGCACTGCA CCCGCGTCCG GTAGTTTTTC CAATCAATTG
AAATTTGCGT TAGTATCCTG TCAACATTAT GAGCAAGGTT ATTACACAGC TTATAAATAT
ATTGCACAGG ATGACCTGGA TTTAGTTGTC CATGTTGGCG ATTACATCTA CGAAGGTGGG
ATCAATCTGA CTCGACCAAG ACAACACAAT AGTTCTGAAA TTTTCACCTT AGAAGACTAT
CGCAATCGTC ACGCCTTATA TAAAACTGAT GTCAATCTGC AAGCTACCCA TGCAGCTTTC
CCTTGGATTG TCACTTGGGA TGACCATGAG GTGGAAAACA ACTACGCCAA CTTGATCTCA
GAAATTGACA CTGAAGCAGA CCAAGATCCA GCTATCTTTG CACAACGGCG AGCCATTGCC
TATCAGGCTT ATTATGAACA TATGCCTCTG CGTCCCTTCT CTCGACCAGT CGGCCCTGAT
ATGCAGCTTT ACCGCCGATT AAACTTTGGC AACTTAGCCA CATTCCATGT TTTAGACACT
CGTCAGTATC GCACCGATCA ACCCTGTGGT GATGGTACGA GAACAGGTTG TTTAGATGCG
CTTAATCCCA ATGCCACTAT TACAGGTAAA GCTCAAGAAG ATTGGCTATT TGATGGACTA
GATAAATCTT CTGCTAGGTG GAATGTGTTA GCACAGCAAG TTCCCATTGC TCAGAGAGAC
TTTACACCAG GAGAGGGTCA ATCTTTCAGC ATGGATAAAT GGGATGGATA TGTGGCTTCC
CGCGATCGCT TGATGGCTTT TATTGCACAG CGTCAACCAT CTAACCCTAT ATCCCTAGCA
GGTGATGTGC ATTCTCACTG GGCAATGGAT CTCAAGGCCA ATTTCAATAA CCCAGAATCT
GCTACATTGG GTAGTGAGTT TGTCTGTACT TCTATTAGCT CTGGTGGGGA TGGTGCAGAT
ACTAGTCCCG CAGTGCAAGC GTATTTACCA GATAATCCCC ACATTAAGTT CTACAACGGT
CAACGGGGAT ATGTGCGTTG TACCGTCAGT CCTACCACTT GGCGATCAGA CTATCTGGTA
ATGTCAAATG TCTTAACTCC ATCTGGAACA ATTAGCAATC GAGCTTCATT TGTAGTTGAC
AATGGTCTCC CTGGAATACG ACAAGTAGTT TAG
|
|---|
| Protein sequence | MVDYHNVQKF LQSRIKRRNL IIGGGAFTGL AIASQFSHQR AIARGRFSDY PFKLGVASGE
PYDTSVVIWT RLAPEPLNGG GMPPVNVPIR WEVATDSNMK RIISRGTVLA TPELAHSVRV
VVEGLSPHTW YWYRFNVGNE ASPIGRTRTA PASGSFSNQL KFALVSCQHY EQGYYTAYKY
IAQDDLDLVV HVGDYIYEGG INLTRPRQHN SSEIFTLEDY RNRHALYKTD VNLQATHAAF
PWIVTWDDHE VENNYANLIS EIDTEADQDP AIFAQRRAIA YQAYYEHMPL RPFSRPVGPD
MQLYRRLNFG NLATFHVLDT RQYRTDQPCG DGTRTGCLDA LNPNATITGK AQEDWLFDGL
DKSSARWNVL AQQVPIAQRD FTPGEGQSFS MDKWDGYVAS RDRLMAFIAQ RQPSNPISLA
GDVHSHWAMD LKANFNNPES ATLGSEFVCT SISSGGDGAD TSPAVQAYLP DNPHIKFYNG
QRGYVRCTVS PTTWRSDYLV MSNVLTPSGT ISNRASFVVD NGLPGIRQVV
|
|---|
| |