Gene Ava_4115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4115 
Symbol 
ID3681503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5130291 
End bp5131388 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content44% 
IMG OID637719462 
Productglutamate dehydrogenase (NADP) 
Protein accessionYP_324610 
Protein GI75910314 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0838715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATA TTTTTCGCTT TGCTGATGAG CTAGGCCCAG CCAAGATTAT TCATATCTAC 
GAAAGAGAAG CTGATCTAAA AGCCATTGTT GTGGTTGATA ACATTGATTG TGGCCCTGCG
ATCGGTGGAG TACGTATGGC TACAGATGTG ACTACAGAAG AAGTTTTTCG ATTGGCACGA
GCTATGACTT TAAAAAATGC TGCTGCTGAC TTACCCCACG GCGGCGGTAA ATCTGCAATC
TTAGCCGACC CGAAACAACC TTTAGCAGAT AAGGAACGCT TGGTACGTAC CTTTGCTCGT
GCTATCAGGG ATGTGACTGA GTATATCCCT GGCCCCGATA TGGGAACAGA TGAACAGTGT
ATGGCTTGGA TCAAAGAAGA GATTGGTCGT GCTGTAGGAC TACCAAAAGC AATAGGGGGT
ATCCCCTTGG ATGAAATTGG TGCTACTGGT TTTGGCCTAA GTATCTGTGC AGAGATAGCT
AGCAAGTTTT GTCACCTCAA TTTAGAAGGC GCACGTATTG TCATTCAAGG TTTCGGTTCT
GTTGGGAAAA ACGCTGCTCG CTTTTTAACG GCTAAAGGAG CGTTACTTAT AGGAGCCGCA
GATTCTCAAG GAACTCTCTT TAATCCTCTG GGAATCGATG TTAAGCAGTT AATCAAACTA
AAAAATTCTG GTAAGAGTGT GATTAGTTAT CCACAGGGAG ACAAACTAGA TCGGGACGCA
GTTATTGACA TCGAGTGCGA TATTTGGATA CCAGCAGCCA GACCCGATAT TATCCATGCT
GATAATGTTG ACCGCCTGAA AACTCAGCTT GTGATCTCAG GTGCTAATAT CCCGTTTACC
GAAGCAGCAG AAAGGATATG TCATGAACGA AATATTATTG TAGTACCTGA TTTCATCGCC
AATGCAGGTG GTGTAATCTG CGCTGCGGTT GAGTATGATG GCGGAAATCA GACCACAGCC
TTTGAAACTA TTGCAAAGAA AATTCGCTAC AATACGACGC TAGTTTTAGA ACAAGTTGCC
AAAACAGGTA AGCTACCACG ACAGGCTGCT GTGGAACTTG CCCAGAGACG GATATGTCTT
GCTAGACAAG ATATTTAA
 
Protein sequence
MDNIFRFADE LGPAKIIHIY EREADLKAIV VVDNIDCGPA IGGVRMATDV TTEEVFRLAR 
AMTLKNAAAD LPHGGGKSAI LADPKQPLAD KERLVRTFAR AIRDVTEYIP GPDMGTDEQC
MAWIKEEIGR AVGLPKAIGG IPLDEIGATG FGLSICAEIA SKFCHLNLEG ARIVIQGFGS
VGKNAARFLT AKGALLIGAA DSQGTLFNPL GIDVKQLIKL KNSGKSVISY PQGDKLDRDA
VIDIECDIWI PAARPDIIHA DNVDRLKTQL VISGANIPFT EAAERICHER NIIVVPDFIA
NAGGVICAAV EYDGGNQTTA FETIAKKIRY NTTLVLEQVA KTGKLPRQAA VELAQRRICL
ARQDI