| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4086 |
|---|
| Symbol | |
|---|
| ID | 3681609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5077980 |
|---|
| End bp | 5079218 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637719437 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_324585 |
|---|
| Protein GI | 75910289 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.3591 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGTAG TTATGGGACT GTCATCGGTG GTAGTGTATC ACTTTTTTGC TTATAGTCTC
AGTCAGCAAT TAGATAGGCA GTTGTTGACG TTGGCGGATG CAGCAGCTCA TAATTTATCG
GCTATTAAGG TGGATAAGAT GGCTGTAAAC CGCAAGATGC CGCGAATTTT AGATAATGAT
GGGGATTTAG ATATTCCTTG GCAAGATTTA CGGTTATATC GTCAGAGTGT GGAATGGTTT
GATGCTGGGC AGCAATTATT AGGAAAGGCA GGAAAGCCAT TTCCCGAAAC ACCATTTCTA
ACTAATTTTC ACTCATGGCA GCAAAATGGC ATCAGGATAT TAACTATTCC GGTTTATTCT
TCCAGAAAAA ATCAACAACT TTTAGGTTAT GTGCGTGTCA GTGCATCAAC AGTTGAAATA
CAAAAAGAAC TGGAGAGACT GTTGATGGGT TTGGGTATTG GTGGTGTTTT GGGGATGGTT
TTAATTAGTG GTACAGGTTG GTGGCTAACG AGTAAAGCCT TGCAACCGAT TGAGCAGAGT
TTCCAGCAAT TACAACAGTT TACGGCGGAT GCGTCCCATG AATTACGCAG TCCTCTGACG
GCGATTAAAA CGACTGTGGA AGTTATCCAA AGTCACCCAG AACGTATTCA TCCCAGTGAT
GTCAAAAAAA TCGACATCAT AGAGGGTGCA ACACAGCAGA TGACGCACTT AGTAGAGGAT
TTACTATTGT TAGCCAGAAG TGATTCTGCA CCTATAAGTT TGCCTAAAAC CGCAATTCCC
ATACCCATAG ATGAAATTTT AATTGATTTA ATTGATACCT TACAGCCGCA GGCAAAATCT
CAAGAAATTA CTTTAGAGGC TAACTTGATT GATGCGGTGT GGGTAAAGGG GGATGCACAT
CAGTTACAAC GACTATTTGG TAATTTATTA GAAAATGCCC TGCAATATAC GTCTAATGGT
GGTTTAGTCA GGGTAGAAAT CGTTAAAAGG GATGATTTTG TAGTGATTGA AGTGGCAGAT
ACTGGTATTG GTATCGCACC TGAAAATCTG CCTTTTGTAT TTAATCGCTT TTGGCGAGCT
GAAAAAGCCC GTTCTCGTCG TCAAGGTGGT TCGGGTTTGG GTTTAGCTAT TGCCCAAGCT
ATTACTCATG CTCATGGTGG TGAGATTTCT GTGACGAGTA AAGTCGGTGT GGGAAGTTGT
TTTCGCGTGA AGTTACCAGT ATTTAGGTTG GGCAATTAG
|
|---|
| Protein sequence | MMVVMGLSSV VVYHFFAYSL SQQLDRQLLT LADAAAHNLS AIKVDKMAVN RKMPRILDND
GDLDIPWQDL RLYRQSVEWF DAGQQLLGKA GKPFPETPFL TNFHSWQQNG IRILTIPVYS
SRKNQQLLGY VRVSASTVEI QKELERLLMG LGIGGVLGMV LISGTGWWLT SKALQPIEQS
FQQLQQFTAD ASHELRSPLT AIKTTVEVIQ SHPERIHPSD VKKIDIIEGA TQQMTHLVED
LLLLARSDSA PISLPKTAIP IPIDEILIDL IDTLQPQAKS QEITLEANLI DAVWVKGDAH
QLQRLFGNLL ENALQYTSNG GLVRVEIVKR DDFVVIEVAD TGIGIAPENL PFVFNRFWRA
EKARSRRQGG SGLGLAIAQA ITHAHGGEIS VTSKVGVGSC FRVKLPVFRL GN
|
|---|
| |