| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4082 |
|---|
| Symbol | |
|---|
| ID | 3681605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5071895 |
|---|
| End bp | 5072464 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637719433 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_324581 |
|---|
| Protein GI | 75910285 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.492464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTA AAGAACTTCT CAATCGATAC GCAGCTGGAG AACGAAACTT CCAAGGCATC
ATATTACCAA AAGCAGACCT ACAGGGTGTT AACTTGGGAG GTGTAGACTT TGGTAGAGCT
GATCTACAGG GAGCTAACCT AGCCAAAGCC TCCATGAATG GAGCTAATCT GTGTCAAGCA
AATCTTCAAG GTGCAAACCT AGAACACGCA AATTTATCTG AAGTTATTTT TAGTGGAGCT
AATTTGCGTG AAGCTACACT AACAACAGCT AACCTCAATG AATCAGACTT TAGTGGTGCA
TATCTTTGTG GTGCAGACTT ACGTGAGGCT AGTTTGCATA TGGCATTAAT GAGCGCCGCA
AACTTGCAGC GTGTAAACCT GAGTGATGCC AAAATGAGCG GAGTCAGGAT GTGGAAAGCT
GATTTGCGAG AATCAGACCT GAGTGGTGCT GATTTAAGTG AAGCAAATCT GAGTGAGGTG
AACCTGACTG GGGCAAATTT AAATGCCACA GATATGAGTG AAGCCTTTTT AACTGGGACA
ATTATGCCTG ACGGTACTAT TCATAAATAA
|
|---|
| Protein sequence | MDIKELLNRY AAGERNFQGI ILPKADLQGV NLGGVDFGRA DLQGANLAKA SMNGANLCQA
NLQGANLEHA NLSEVIFSGA NLREATLTTA NLNESDFSGA YLCGADLREA SLHMALMSAA
NLQRVNLSDA KMSGVRMWKA DLRESDLSGA DLSEANLSEV NLTGANLNAT DMSEAFLTGT
IMPDGTIHK
|
|---|
| |