| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4017 |
|---|
| Symbol | hisH |
|---|
| ID | 3681249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5001812 |
|---|
| End bp | 5002447 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637719369 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisH |
|---|
| Protein accession | YP_324517 |
|---|
| Protein GI | 75910221 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0118] Glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.776843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.756687 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTTG TTGCTGTTAT AGATTATGAG ATGGGAAATT TGCATTCGGT TTGCAAAGGA
TTAGAAAAAG CGGGGGCGAC TCCTATAATT ACTCATTCTC ATCAGGAATT AACTAAGGCC
GATGCAGTCA TATTGCCGGG AGTGGGAGCA TTTGACCCAG CAGTGCAGAG TTTGCGATCG
CGTGATTTAG AACAACCAAT TAAAGATACA ATCGCTTCAG GCAAACCCTT CTTAGGTATC
TGTTTAGGGC TGCAAATTCT GTTTGAATCG AGTGCGGAAG GTACTCAACC AGGACTAGGA
ATTATCAAAG GAAAAGTGCG GCGGTTTATT TCTGAACCAG GAATTACCAT TCCCCACATG
GGTTGGAATC AGTTGGAATT AACCCAACCA AAAAGCATTT TGTGGGAGCA TTTGCCACCC
CAACCTTGGG TATATTTTGT ACATTCCTAC TATGTTGACC CAGTTGAGCC TCAAGTTCGT
GCTGCAACTG TTACTCACGG TACGCAAACC GTTACGGCAG CTATTGCCCA TGAAAACCTG
ATGGCAGTAC AATTTCATCC CGAAAAATCG TCAAATATTG GGCTGCAAAT CCTGTCTAAT
TTTGTCTCCC AAGTACGGGA AAAAATTGCT GCATAA
|
|---|
| Protein sequence | MPVVAVIDYE MGNLHSVCKG LEKAGATPII THSHQELTKA DAVILPGVGA FDPAVQSLRS
RDLEQPIKDT IASGKPFLGI CLGLQILFES SAEGTQPGLG IIKGKVRRFI SEPGITIPHM
GWNQLELTQP KSILWEHLPP QPWVYFVHSY YVDPVEPQVR AATVTHGTQT VTAAIAHENL
MAVQFHPEKS SNIGLQILSN FVSQVREKIA A
|
|---|
| |